Bioinformatics Server: FATCAT -- Godzik's lab in Burnham Institute

FATCAT database searching report for query: query

The frequency of twists along query in comparing with its similar structures (P-value<=0.05) (graph, ps, text)

Try a different P-value (0-0.2) for fewer (small value) or more hits (large value)

Extract results:

Searching database: scop167_40 (scop 1.67 version, 40% non-redundant set with 6600 structures)
Notes: the hits are ranked by the P-value threshold (only hits with P-value < 0.05 are significantly similar to the query; others are just for reference); the code for each structure is listed in the table; move the mouse over the structure ID for the description of each structure; click on the structure ID to retrieve the full description; click "view" to retrive the alignment
The list of similar structures with probability < 5.00e-02
no	structure	code	length	score	P-value	twist	opt-len	opt-rmsd	chain-rmsd	align-len	gap	align
1	d1iwma_	b.125.1.2	177	528.00	0.00e+00	0	177	0.00	0.00	177	0	view
2	d1iwla_	b.125.1.1	177	220.86	9.91e-05	1	116	3.29	6.15	169	53	view
3	d1umwa2	d.223.1.2	94	140.94	2.70e-04	0	75	3.14	2.41	98	23	view
4	d1o1va_	b.60.1.2	127	159.88	7.87e-04	1	104	2.92	12.05	160	56	view
5	d1ifc__	b.60.1.2	131	154.13	9.43e-04	1	98	2.61	6.84	171	73	view
6	d1crb__	b.60.1.2	134	151.39	1.33e-03	1	108	2.96	6.78	173	65	view
7	d1ospo_	b.76.1.1	251	190.41	1.58e-03	1	112	3.04	14.92	223	111	view
8	d1p6pa_	b.60.1.2	125	144.75	1.65e-03	1	100	2.74	5.86	171	71	view
9	d1p4ta_	f.4.1.1	155	167.07	1.89e-03	1	99	3.23	6.40	177	78	view
10	d1lfo__	b.60.1.2	126	151.95	2.02e-03	1	103	3.26	5.49	173	70	view
11	d1k24a_	f.4.4.2	249	174.35	2.67e-03	1	122	3.16	4.48	276	154	view
12	d1hms__	b.60.1.2	131	156.97	2.94e-03	1	106	3.81	7.40	169	63	view
13	d1lshb_	f.7.1.1	174	164.63	3.00e-03	1	115	3.75	11.78	208	93	view
14	d1umwa1	d.223.1.2	128	145.83	3.02e-03	1	87	2.77	12.71	132	45	view
15	d1r0ua_	b.60.1.5	142	169.23	3.63e-03	2	109	3.05	14.40	174	65	view
16	d1mdc__	b.60.1.2	131	144.52	7.19e-03	1	104	4.02	8.32	172	68	view
17	d1i78a_	f.4.4.1	297	169.69	8.23e-03	1	126	3.50	5.88	319	193	view
18	d1qjpa_	f.4.1.1	137	145.42	9.46e-03	1	94	3.86	14.01	169	75	view
19	d1e54a_	f.4.3.1	331	177.29	9.97e-03	1	117	3.33	8.48	227	110	view
20	d1r7aa1	b.71.1.1	70	103.45	1.05e-02	0	50	3.09	3.90	59	9	view
21	d3prn__	f.4.3.1	289	170.49	1.13e-02	1	113	3.57	8.01	190	77	view
22	d1nqna_	b.61.1.1	118	126.82	1.21e-02	1	84	3.13	11.41	157	73	view
23	d1uynx_	f.4.5.1	279	199.26	1.24e-02	3	130	2.99	11.28	301	171	view
24	d1kcgc_	d.19.1.1	170	122.98	1.49e-02	1	96	2.78	8.83	142	46	view
25	d2por__	f.4.3.1	301	171.05	1.61e-02	2	134	3.03	14.66	201	67	view
26	d1f1sa3	b.24.1.1	73	94.41	1.72e-02	0	52	3.05	2.53	93	41	view
27	d1qd6.1	f.4.2.1	253	159.73	1.78e-02	2	127	3.09	5.91	253	126	view
28	d1mm5a_	f.4.1.2	170	160.62	1.86e-02	2	100	3.54	9.26	231	131	view
29	d1epaa_	b.60.1.1	160	123.83	1.88e-02	1	88	2.92	5.88	151	63	view
30	d1pbya5	b.61.4.1	108	146.27	1.89e-02	2	91	3.64	8.53	143	52	view
31	d1luqa_	b.61.1.1	119	118.25	2.02e-02	1	83	3.13	9.05	153	70	view
32	d1ekga_	d.82.2.1	119	128.55	2.03e-02	2	89	2.64	10.47	132	43	view
33	d1lf7a_	b.60.1.1	164	127.59	2.04e-02	1	85	3.02	5.82	143	58	view
34	d1a0tp_	f.4.3.2	413	178.12	2.05e-02	1	113	3.15	9.87	218	105	view
35	d1jmxa5	b.61.4.1	119	144.32	2.08e-02	2	95	3.59	7.04	156	61	view
36	d1l3aa_	d.18.1.2	166	128.26	2.32e-02	1	86	3.19	11.68	180	94	view
37	d1uuza_	d.233.1.1	129	115.49	2.58e-02	1	77	2.86	12.92	129	52	view
38	d1lsha2	f.7.1.1	267	160.93	2.59e-02	2	118	3.13	10.23	257	139	view
39	d1gjwa1	b.71.1.1	64	78.36	2.61e-02	0	33	1.63	1.57	69	36	view
40	d1g99a1	c.55.1.2	156	118.75	2.71e-02	1	91	3.20	6.52	160	69	view
41	d1iz5a1	d.131.1.2	119	129.08	2.72e-02	3	91	2.26	12.05	179	88	view
42	d1qj8a_	f.4.1.1	148	146.56	2.72e-02	2	113	4.20	16.08	193	80	view
43	d1rwza1	d.131.1.2	122	126.35	2.81e-02	3	92	2.19	12.37	178	86	view
44	d1rwza2	d.131.1.2	122	136.52	2.84e-02	3	91	2.54	10.59	161	70	view
45	d1ukfa_	d.3.1.10	188	138.56	2.84e-02	1	88	3.70	13.70	134	46	view
46	d1gqza1	d.21.1.1	130	118.33	2.90e-02	1	85	3.45	8.52	174	89	view
47	d1n62c1	d.87.2.1	109	90.75	2.92e-02	0	59	3.13	3.73	105	46	view
48	d1kxoa_	b.60.1.1	165	128.60	2.98e-02	1	97	3.95	7.67	179	82	view
49	d1cb8a2	b.24.1.1	100	103.45	3.02e-02	1	73	2.69	11.33	137	64	view
50	d1hdma2	d.19.1.1	81	86.40	3.03e-02	0	54	3.07	5.04	74	20	view
51	d1plq_1	d.131.1.2	126	129.03	3.07e-02	3	90	2.26	11.32	178	88	view
52	d1kt7a_	b.60.1.1	175	144.43	3.21e-02	2	103	3.46	6.52	188	85	view
53	d1lnia_	d.1.1.2	96	88.66	3.22e-02	0	54	3.06	6.07	92	38	view
54	d1iz5a2	d.131.1.2	121	136.70	3.23e-02	3	92	2.70	13.37	144	52	view
55	d1axca2	d.131.1.2	125	137.75	3.24e-02	3	92	2.69	10.83	160	68	view
56	d1sdja1	d.21.1.2	138	125.17	3.32e-02	2	112	3.42	14.48	152	40	view
57	d1aqt_2	b.93.1.1	85	99.53	3.35e-02	2	63	1.61	10.74	124	61	view
58	d3frua2	d.19.1.1	178	116.33	3.47e-02	1	82	2.73	6.90	138	56	view
59	d2mpra_	f.4.3.2	421	174.62	3.61e-02	1	123	3.91	9.65	258	135	view
60	d1zaga2	d.19.1.1	179	113.58	3.65e-02	1	82	2.63	7.46	141	59	view
61	d1mmia1	d.131.1.1	122	127.34	3.66e-02	3	91	2.42	12.98	178	87	view
62	d1n7oa2	b.24.1.1	76	85.06	3.76e-02	0	51	3.15	3.23	92	41	view
63	d1faoa_	b.55.1.1	100	99.67	3.82e-02	1	74	2.76	8.74	97	23	view
64	d1l6ma_	b.60.1.1	174	117.16	3.83e-02	1	88	3.14	5.66	171	83	view
65	d1rwha2	b.24.1.1	113	109.61	3.91e-02	1	67	2.83	11.16	136	69	view
66	d1ggxa_	d.22.1.1	216	145.71	3.94e-02	3	130	3.02	13.54	226	96	view
67	d1ik9a1	b.59.1.1	113	130.14	3.98e-02	2	97	3.87	12.04	120	23	view
68	d1j3wa_	d.110.7.1	134	122.26	4.04e-02	2	93	2.97	15.54	163	70	view
69	d1b77a2	d.131.1.2	118	124.61	4.18e-02	2	75	2.74	10.92	167	92	view
70	d1k3ba_	b.61.5.1	119	112.06	4.22e-02	1	62	2.73	5.95	116	54	view
71	d1plq_2	d.131.1.2	132	134.01	4.23e-02	3	89	2.64	10.76	164	75	view
72	d1hxxa_	f.4.3.1	340	181.87	4.24e-02	2	114	3.59	11.45	290	176	view
73	d1oo0a_	d.232.1.1	144	112.66	4.24e-02	1	76	3.00	10.74	142	66	view
74	d1mbya_	d.223.1.1	75	98.07	4.39e-02	1	66	2.87	11.85	74	8	view
75	d1oxda_	d.22.1.1	226	143.39	4.46e-02	3	129	2.92	14.00	237	108	view
76	d1eh9a2	b.71.1.1	67	78.53	4.46e-02	0	32	1.88	2.45	70	38	view
77	d1mola_	d.17.1.1	94	110.08	4.50e-02	1	65	3.25	12.24	99	34	view
78	d1dyna_	b.55.1.1	113	102.35	4.54e-02	1	73	2.84	8.73	107	34	view
79	d1h10a_	b.55.1.1	115	99.93	4.59e-02	1	72	2.66	8.57	101	29	view
80	d1h3qa_	d.110.4.3	140	115.95	4.60e-02	1	76	3.34	11.63	118	42	view
81	d1omwa2	b.55.1.1	113	103.09	4.72e-02	1	72	2.89	5.82	135	63	view
82	d1uvqa2	d.19.1.1	83	81.67	4.72e-02	0	52	3.09	3.35	75	23	view
83	d1gqza2	d.21.1.1	144	115.41	4.73e-02	2	90	2.59	11.43	162	72	view
84	d1mixa2	b.55.1.5	92	89.90	4.85e-02	1	67	2.33	8.93	92	25	view
85	d1qbea_	d.85.1.1	123	114.43	4.86e-02	1	67	3.18	4.10	105	38	view
86	d1axca1	d.131.1.2	124	126.77	4.98e-02	3	98	2.88	12.09	179	81	view

Contact: Yuzhen Ye
Godzik Laboratory, The Burnham Institute.
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