BLASTP 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1112623686-30608-172111666647.BLASTQ2 Query= gi|3915974|sp|P75957|LOLD_ECOLI Lipoprotein releasing system ATP-binding protein lolD (233 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 2,419,489 sequences; 819,463,594 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
RID: 1112623686-30608-172111666647.BLASTQ2
Query= gi|3915974|sp|P75957|LOLD_ECOLI Lipoprotein releasing system ATP-binding protein lolD (233 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 2,419,489 sequences; 819,463,594 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Taxonomy reports
Score E Sequences producing significant alignments: (bits) Value gi|34557766|ref|NP_907581.1| PROBABLE TRANSMEMBRANE ATP-BIN... 345 5e-94 gi|32263409|gb|AAP78454.1| ABC transporter [Helicobacter he... 333 3e-90 gi|6968074|emb|CAB75243.1| ABC-type transmembrane transport... 323 3e-87 gi|57238197|ref|YP_178722.1| macrolide-specific efflux prot... 322 4e-87 gi|57242014|ref|ZP_00369954.1| ABC transporter, ATP-binding... 320 1e-86 gi|57167636|ref|ZP_00366776.1| ABC transporter, ATP-binding... 316 3e-85 gi|57240328|ref|ZP_00368277.1| ABC transporter, ATP-binding... 314 1e-84 gi|6969079|emb|CAB73650.1| putative ABC transport system AT... 308 8e-83 gi|57238674|ref|YP_179805.1| ABC transporter, ATP-binding p... 306 2e-82 gi|57240579|ref|ZP_00368528.1| ABC transporter, ATP-binding... 301 9e-81 gi|34557887|ref|NP_907702.1| ABC TRANSPORT PROTEIN [Wolinel... 296 2e-79 gi|32262265|gb|AAP77313.1| conserved hypothetical protein [... 292 6e-78 gi|2314761|gb|AAD08616.1| ABC transporter, ATP-binding prot... 286 4e-76 gi|15612549|ref|NP_224202.1| abc transporter, ATP-binding p... 282 6e-75 gi|57241114|ref|ZP_00369061.1| ABC transporter, ATP-binding... 279 5e-74 gi|2440008|gb|AAC45666.1| AbcC [Helicobacter pylori] 278 9e-74 gi|57242092|ref|ZP_00370032.1| probable abc transporter ATP... 268 7e-71 gi|57237750|ref|YP_178998.1| amino acid ABC transporter, AT... 267 2e-70 gi|57168777|ref|ZP_00367908.1| ABC transporter, ATP-binding... 265 7e-70 gi|34556714|ref|NP_906529.1| AMINO ACID PERMEASE ATP-BINDIN... 263 4e-69 gi|1072932|pir||C48518 ABC-type transport protein (PEB1 5' ... 261 9e-69 gi|57237619|ref|YP_178867.1| ABC transporter, ATP-binding p... 259 5e-68 gi|57167770|ref|ZP_00366910.1| ABC transporter, ATP-binding... 250 2e-65 gi|34558234|ref|NP_908049.1| ABC TRANSPORT ATP-BINDING PROT... 249 3e-65 gi|57505383|ref|ZP_00371311.1| ABC transporter, ATP-binding... 249 6e-65 gi|57241071|ref|ZP_00369018.1| amino acid ABC transporter, ... 249 6e-65 gi|6967940|emb|CAB75107.1| amino-acid ABC transporter ATP-b... 246 4e-64 gi|57237523|ref|YP_178537.1| amino acid ABC transporter, AT... 246 6e-64 gi|57241162|ref|ZP_00369109.1| glutamine ABC transporter, A... 242 5e-63 gi|57505195|ref|ZP_00371127.1| glutamine/glutamate ABC tran... 239 4e-62 gi|34556821|ref|NP_906636.1| ABC-TYPE TRANSPORTER, ATPASE C... 238 8e-62 gi|57237731|ref|YP_178979.1| amino acid ABC transporter, AT... 234 2e-60 Alignments >gi|34557766|ref|NP_907581.1| PROBABLE TRANSMEMBRANE ATP-BINDING ABC TRANSPORTER PROTEIN [Wolinella succinogenes DSM 1740] gi|34483483|emb|CAE10481.1| PROBABLE TRANSMEMBRANE ATP-BINDING ABC TRANSPORTER PROTEIN [Wolinella succinogenes] Length = 643 Score = 345 bits (888), Expect = 5e-94 Identities = 97/225 (43%), Positives = 150/225 (66%), Gaps = 1/225 (0%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M K L++ + + + G + +VL + + GE +AI+G+SGSGKSTL+++LG LD Sbjct: 1 MQKPLIELKGVSRVFNLGGLAVEVLKGIDLQIYPGEFVAIMGASGSGKSTLMNILGCLDR 60 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPA 120 P+ G+ +F G+ +S L A+LR ++ GFI+Q +HL+ A ENV +P + Sbjct: 61 PSQGEYLFRGESVSLLHRDDLAQLRREEFGFIFQSYHLIHALDARENVEVPAIYAGAGIV 120 Query: 121 EINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARN 180 E RA E+L ++GL R +HRPS+LSGG++QRV+IARAL+N R++LADEPTG LD+R+ Sbjct: 121 EREKRAEELLGSLGLGERLHHRPSQLSGGQQQRVSIARALMNGGRVILADEPTGALDSRS 180 Query: 181 ADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTA 225 + + QLL EL+R QG +++THD +A +R +EM+DG++T Sbjct: 181 GEEVMQLLMELSR-QGHTIILITHDSHVASHANRVIEMKDGQITH 224 >gi|32263409|gb|AAP78454.1| ABC transporter [Helicobacter hepaticus ATCC 51449] gi|32267356|ref|NP_861388.1| ABC transporter [Helicobacter hepaticus ATCC 51449] Length = 229 Score = 333 bits (857), Expect = 3e-90 Identities = 94/223 (42%), Positives = 138/223 (61%) Query: 6 LQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGD 65 ++ N+ K Y +G + L V + +GE +A++G SGSGKS+L ++LG LD +SG+ Sbjct: 5 IKLHNVRKTYGKGESAFEALKGVDLLIDKGEFVALMGPSGSGKSSLANILGTLDVGSSGE 64 Query: 66 VIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSR 125 F + +L+ +A LR +GFI+Q +LL TALENV +PL+ K E Sbjct: 65 YWFYDVNVFELTQNQRALLRRNYIGFIFQGFNLLARTTALENVELPLMYRGVKKTEREEI 124 Query: 126 ALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIF 185 AL+ L VGL A+H ++LSGG++QRVAIARA+ + P +LADEPTGNLD + + I Sbjct: 125 ALKALDKVGLKDWASHTSAKLSGGQQQRVAIARAIASEPLFLLADEPTGNLDTKRSVEIM 184 Query: 186 QLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 ++L ELN+ G L+VTH+ +AK SR+L DGRL ++ Sbjct: 185 EILQELNQNLGITILMVTHEPDMAKYASRELHFLDGRLISDSK 227 >gi|6968074|emb|CAB75243.1| ABC-type transmembrane transport protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|11278932|pir||F81408 ABC-type transmembrane transport protein Cj0607 [imported] - Campylobacter jejuni (strain NCTC 11168) gi|15791967|ref|NP_281790.1| ABC-type transmembrane transport protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 641 Score = 323 bits (830), Expect = 3e-87 Identities = 93/229 (40%), Positives = 155/229 (67%), Gaps = 5/229 (2%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 ++ N+CK E + +L NVS S+ +GE +AI+G SGSGK++LL+++G LDTP+SG Sbjct: 1 MIFLKNICKNIGENA----ILKNVSLSIEKGEFVAIIGQSGSGKTSLLNIIGTLDTPSSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124 +F+ ++KL++ KA LR +K+GFI+Q ++LL +A ENV++P + K E + Sbjct: 57 TYVFDEYEVTKLNNDEKARLRREKIGFIFQRYNLLSLLSAKENVSLPAVYAGKNLQERSQ 116 Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 A ++L + L H+ + +P+ELSGG++QRV+IARAL+N L+LADEPTG LD+++ + Sbjct: 117 NAKKLLNDLELAHKLDSKPNELSGGQQQRVSIARALINGGELILADEPTGALDSKSGIMV 176 Query: 185 FQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE 233 ++L +LN QG ++VTHD ++A + R +E++DG + ++ A+ Sbjct: 177 LEILQKLN-EQGHTIVLVTHDPKIAAQAKRVIEIKDGEILSDTKKEKAQ 224 >gi|57238197|ref|YP_178722.1| macrolide-specific efflux protein macB [Campylobacter jejuni RM1221] gi|57167001|gb|AAW35780.1| macrolide-specific efflux protein macB [Campylobacter jejuni RM1221] Length = 641 Score = 322 bits (829), Expect = 4e-87 Identities = 93/229 (40%), Positives = 155/229 (67%), Gaps = 5/229 (2%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 ++ N+CK E + +L NVS S+ +GE +AI+G SGSGK++LL+++G LDTP+SG Sbjct: 1 MIFLKNICKNIGENA----ILKNVSLSIEKGEFVAIIGQSGSGKTSLLNIIGTLDTPSSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124 +F+ ++KL++ KA LR +K+GFI+Q ++LL +A ENV++P + K E + Sbjct: 57 TYVFDEYEVTKLNNDEKARLRREKIGFIFQRYNLLSLLSAKENVSLPAVYAGKNLQERSQ 116 Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 A ++L + L H+ + +P+ELSGG++QRV+IARAL+N L+LADEPTG LD+++ + Sbjct: 117 NAKKLLNDLELAHKLDSKPNELSGGQQQRVSIARALINGGELILADEPTGALDSKSGIMV 176 Query: 185 FQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE 233 ++L +LN QG ++VTHD ++A + R +E++DG + ++ A+ Sbjct: 177 LEILQKLN-EQGHTIVLVTHDPKIAAQAKRVIEIKDGEILSDTKKEKAQ 224 >gi|57242014|ref|ZP_00369954.1| ABC transporter, ATP-binding protein [Campylobacter upsaliensis RM3195] gi|57017206|gb|EAL53987.1| ABC transporter, ATP-binding protein [Campylobacter upsaliensis RM3195] Length = 641 Score = 320 bits (824), Expect = 1e-86 Identities = 88/228 (38%), Positives = 149/228 (65%), Gaps = 5/228 (2%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ +N+ K+ + +L ++ + +GE +AI+G SGSGK++LL+++G LD P+ G Sbjct: 1 MIKLENISKKIGQN----TILKQINLQIEKGEFVAIIGQSGSGKTSLLNIIGTLDEPSGG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124 F ++ L+ KA LR +K+GFI+Q ++LLP +A ENV++P + KK E N Sbjct: 57 RFFFENYEVTNLNKDEKARLRREKIGFIFQRYNLLPLLSAKENVSLPSVYAGKKSEERNQ 116 Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 RA +L+ + L H+ N +P+ELSGG++QRV+IARAL+N L+LADEPTG LD+++ + Sbjct: 117 RATNLLENLELSHKMNSKPNELSGGQQQRVSIARALMNGGELILADEPTGALDSKSGVMV 176 Query: 185 FQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGA 232 ++L +LN QG ++VTHD ++A + R +E++DG + ++ Sbjct: 177 LEILQKLN-TQGHTIILVTHDPKIAAKAGRVIEIKDGEILSDTKQNSK 223 >gi|57167636|ref|ZP_00366776.1| ABC transporter, ATP-binding protein [Campylobacter coli RM2228] gi|57020758|gb|EAL57422.1| ABC transporter, ATP-binding protein [Campylobacter coli RM2228] Length = 641 Score = 316 bits (813), Expect = 3e-85 Identities = 96/226 (42%), Positives = 155/226 (68%), Gaps = 5/226 (2%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 ++ +N+CK E + +L NVS S+ +GE +AI+G SGSGK++LL+++G LD P+SG Sbjct: 1 MIFLNNICKNIGENA----ILKNVSLSIEKGEFVAIIGQSGSGKTSLLNIIGTLDEPSSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124 IF+ +++L+S KA LR +K+GFI+Q ++LL +A +NVA+P + KK E N Sbjct: 57 SYIFDDYEVTQLNSDEKARLRREKIGFIFQRYNLLNLLSANDNVALPAVYAGKKVQERNF 116 Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 RA E+L + L+H+ +P+ELSGG++QRV+IARAL+N L+LADEPTG LD+++ + Sbjct: 117 RAQELLGNLELEHKIESKPNELSGGQQQRVSIARALMNGGELILADEPTGALDSKSGIMV 176 Query: 185 FQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLM 230 ++L +LN QG ++VTHD ++A + R +E++DG + ++ Sbjct: 177 LEILKKLN-TQGHTIVLVTHDPKIAAQAKRVIEIKDGEILSDSKKD 221 >gi|57240328|ref|ZP_00368277.1| ABC transporter, ATP-binding protein [Campylobacter lari RM2100] gi|57018669|gb|EAL55442.1| ABC transporter, ATP-binding protein [Campylobacter lari RM2100] Length = 643 Score = 314 bits (807), Expect = 1e-84 Identities = 87/222 (39%), Positives = 148/222 (66%), Gaps = 5/222 (2%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ +N+ K T +L N++ + +GE +AI+G SGSGK++LL+++G LD P+SG Sbjct: 1 MIRLENIQK----KINNTTILENINLYIQKGEFVAIIGQSGSGKTSLLNIIGTLDEPSSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124 + ++ L+ KA +R +K+GFI+Q ++LL A +NVA+P + K E + Sbjct: 57 KYFLDAYEVTNLNKDEKARIRREKIGFIFQRYNLLSLLNAKDNVALPAVYAGKNKHERSQ 116 Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 +A E+L + LDH+ +P+ELSGG++QRV+IARAL+N L+LADEPTG LD+++ + Sbjct: 117 KAKELLSFLELDHKELSKPNELSGGQQQRVSIARALMNGGELILADEPTGALDSKSGKIV 176 Query: 185 FQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAE 226 ++L +LN QG ++VTHD ++A R R +E++DG++ ++ Sbjct: 177 LEILNKLN-EQGHTVVLVTHDREIAARAKRVIEIKDGKIISD 217 >gi|6969079|emb|CAB73650.1| putative ABC transport system ATP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|11277319|pir||D81263 probable ABC transport system ATP-binding protein Cj1663 [imported] - Campylobacter jejuni (strain NCTC 11168) gi|15792967|ref|NP_282790.1| putative ABC transport system ATP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 217 Score = 308 bits (792), Expect = 8e-83 Identities = 97/223 (43%), Positives = 140/223 (62%), Gaps = 8/223 (3%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M K L++ +NL K + + L+N++ SV EGE +AI+G SGSGKSTLL++L +DT Sbjct: 2 MKKELIKINNLNKEFG----KVKALNNINLSVYEGEWLAIMGPSGSGKSTLLNILSLMDT 57 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPA 120 P+SG+ I + + + ++ K LR +K+G ++Q HL+P ALENV + + Sbjct: 58 PSSGEYILDNENLEQMDEEQKITLRREKIGLVFQQFHLIPYLNALENVMLSQYYH---SS 114 Query: 121 EINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARN 180 A +L+ VGL HR H PS+LSGGE+QRV IARAL+NNP L+LADEPTGNLD N Sbjct: 115 VDEEDAKMVLEKVGLSHRLTHLPSQLSGGEQQRVCIARALINNPELLLADEPTGNLDEAN 174 Query: 181 ADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRL 223 + Q L +L + +G +++TH+ LAK R L ++ G L Sbjct: 175 EQIVLQTLQKL-KNEGKTIVLITHNPDLAKFADRTLILQHGVL 216 >gi|57238674|ref|YP_179805.1| ABC transporter, ATP-binding protein [Campylobacter jejuni RM1221] gi|57167478|gb|AAW36257.1| ABC transporter, ATP-binding protein [Campylobacter jejuni RM1221] Length = 217 Score = 306 bits (788), Expect = 2e-82 Identities = 96/223 (43%), Positives = 139/223 (62%), Gaps = 8/223 (3%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M K L++ +NL K + + L+N++ SV EGE +AI+G SGSGKSTLL++L +D Sbjct: 2 MKKELIKINNLNKEFG----KVKALNNINLSVYEGEWLAIMGPSGSGKSTLLNILSLMDA 57 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPA 120 P+SG+ I + + + ++ K LR +K+G ++Q HL+P ALENV + + Sbjct: 58 PSSGEYILDNENLEQMDEEQKITLRREKIGLVFQQFHLIPYLNALENVMLSQYYH---SS 114 Query: 121 EINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARN 180 A +L+ VGL HR H PS+LSGGE+QRV IARAL+NNP L+LADEPTGNLD N Sbjct: 115 VDEEDAKMVLEKVGLSHRLTHLPSQLSGGEQQRVCIARALINNPELLLADEPTGNLDEAN 174 Query: 181 ADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRL 223 + Q L +L + +G +++TH+ LAK R L ++ G L Sbjct: 175 EQIVLQTLQKL-KNEGKTIVLITHNPDLAKFADRTLILQHGVL 216 >gi|57240579|ref|ZP_00368528.1| ABC transporter, ATP-binding protein [Campylobacter lari RM2100] gi|57018920|gb|EAL55693.1| ABC transporter, ATP-binding protein [Campylobacter lari RM2100] Length = 218 Score = 301 bits (774), Expect = 9e-81 Identities = 88/224 (39%), Positives = 135/224 (60%), Gaps = 8/224 (3%) Query: 3 KILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT 62 K +++ NL + + + L N++ V +GE +AI+G SGSGKSTLL++L +DT + Sbjct: 2 KNIIKISNLNRNF----NEVKALQNINLEVKQGEWLAIMGPSGSGKSTLLNILSLMDTQS 57 Query: 63 SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEI 122 SG+ + + + LS K+ +R +K+G I+Q HL+P ALENV + + Sbjct: 58 SGEYFLDDKEVGNLSEEEKSVIRREKIGLIFQQFHLIPYLNALENVMLAQFYH---SSIE 114 Query: 123 NSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNAD 182 A+ L+ VGL HR H PS+LSGGE+QR+ IARALVN+P ++LADEPTGNLD N Sbjct: 115 QKDAIMALEKVGLSHRLTHLPSQLSGGEQQRLCIARALVNDPEILLADEPTGNLDEANEK 174 Query: 183 SIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAE 226 +I +L +L + G +++TH+ LA R + + G + +E Sbjct: 175 NILELFCKL-KQDGKTIVLITHNPDLATFADRTIILSHGVMKSE 217 >gi|34557887|ref|NP_907702.1| ABC TRANSPORT PROTEIN [Wolinella succinogenes DSM 1740] gi|34483605|emb|CAE10602.1| ABC TRANSPORT PROTEIN [Wolinella succinogenes] Length = 216 Score = 296 bits (762), Expect = 2e-79 Identities = 91/223 (40%), Positives = 135/223 (60%), Gaps = 9/223 (4%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M+ ++L+ N+ KR+ + L ++ V +GE +I+G SGSGK+TLL++L +DT Sbjct: 1 MS-VVLELKNIEKRFG----EVVALEGINLVVNKGEWTSIMGPSGSGKTTLLNILSLMDT 55 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPA 120 PT G+ G+ S L A + +R +K+G I+Q HL+P +ALENV + + Sbjct: 56 PTRGEYHLGGEDASALDEAKQLLIRREKIGLIFQQFHLIPYLSALENVMIAQYYH---SS 112 Query: 121 EINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARN 180 A E L VGL HR HRPSELSGGE+QR+ IAR+L+NNP ++LADEPTGNLD +N Sbjct: 113 VDEEDAKEALHKVGLTHRLTHRPSELSGGEQQRLCIARSLINNPDILLADEPTGNLDEQN 172 Query: 181 ADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRL 223 I L L R +G +++TH+ L + + + +R GR+ Sbjct: 173 EKVILDLFCRL-REEGKTIILITHNPDLGRYGDKVVRLRHGRM 214 >gi|32262265|gb|AAP77313.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] gi|32266215|ref|NP_860247.1| hypothetical protein HH0716 [Helicobacter hepaticus ATCC 51449] Length = 351 Score = 292 bits (750), Expect = 6e-78 Identities = 81/226 (35%), Positives = 132/226 (58%), Gaps = 5/226 (2%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ +++ K Y G L N+ V +G++M I+G SG+GKSTL+ ++ L+ PTSG Sbjct: 1 MIKLNHINKTYPNG---FVALKNIDLEVAKGDIMGIIGYSGAGKSTLIRIINRLEEPTSG 57 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124 + +G M L +++ QK+G I+Q +LL +NVA L I K I Sbjct: 58 TLFVDGVNMLGLKQKEL-QMQRQKIGMIFQHFNLLSARNVFDNVAFALEIAKWDKKAIKP 116 Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 R E+L+ VGL RA+ PS+LSGG++QRVAIARAL N+P+++L DE T LD + SI Sbjct: 117 RVDELLELVGLSERASFFPSQLSGGQKQRVAIARALANHPKVLLCDEATSALDTKTTKSI 176 Query: 185 FQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAELSL 229 LL ++ R G + +++TH +++ + ++ + DG + S+ Sbjct: 177 LALLRDIQRRLGLSVVLITHQIEVVREICNKMCVVSDGAIVERGSV 222 >gi|2314761|gb|AAD08616.1| ABC transporter, ATP-binding protein (abc) [Helicobacter pylori 26695] gi|7445779|pir||H64716 ABC transporter, ATP-binding protein - Helicobacter pylori (strain 26695) gi|15646183|ref|NP_208367.1| ABC transporter, ATP-binding protein (abc) [Helicobacter pylori 26695] Length = 327 Score = 286 bits (735), Expect = 4e-76 Identities = 78/228 (34%), Positives = 133/228 (58%), Gaps = 5/228 (2%) Query: 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTS 63 ++++ N+ K Y+ G L V+ + +G+++ ++G SG+GKSTL+ L+ L+ P+S Sbjct: 1 MVVELKNIEKIYENG---FHALKGVNLELKKGDILGVIGYSGAGKSTLIRLINCLERPSS 57 Query: 64 GDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIN 123 G+V+ NG + KL + R QK+G I+Q +LL ENVA L I + + +I Sbjct: 58 GEVLVNGVNLLKLKPKELQKAR-QKIGMIFQHFNLLSAKNVFENVAFALEIARWEKNKIK 116 Query: 124 SRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADS 183 SR E+L+ VGL+ + + P +LSGG++QRVAIAR+L N P L+L DE T LD++ S Sbjct: 117 SRVHELLELVGLEDKMHFYPKQLSGGQKQRVAIARSLANCPDLLLCDEATSALDSKTTHS 176 Query: 184 IFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAELSLM 230 I LL + + + + +TH++++ K ++ + G + S+ Sbjct: 177 ILTLLSGIQKKLDLSIVFITHEIEVVKELCNQMCVISSGEIVERGSVE 224 >gi|15612549|ref|NP_224202.1| abc transporter, ATP-binding protein [Helicobacter pylori J99] gi|4156118|gb|AAD07069.1| abc transporter, ATP-binding protein [Helicobacter pylori J99] gi|7445832|pir||F71800 ABC transporter, ATP-binding protein - Helicobacter pylori (strain J99) Length = 327 Score = 282 bits (724), Expect = 6e-75 Identities = 77/228 (33%), Positives = 131/228 (57%), Gaps = 5/228 (2%) Query: 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTS 63 ++++ N+ K Y+ G L V+ + +G+++ ++G SG+GKSTL+ L+ L+ P+S Sbjct: 1 MVVELKNIEKIYENG---FHALKGVNLELKKGDILGVIGYSGAGKSTLIRLINCLERPSS 57 Query: 64 GDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIN 123 G+V+ NG + L + R QK+G I+Q +LL ENVA L I + + +I Sbjct: 58 GEVLVNGVNLLNLKPKELQKAR-QKIGMIFQHFNLLSAKNVFENVAFALEIARWEKTKIK 116 Query: 124 SRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADS 183 SR E+L+ VGL+ + + P +LSGG++QRVAIAR+L N P L+L DE T LD++ S Sbjct: 117 SRVHELLELVGLEDKVHFYPKQLSGGQKQRVAIARSLANCPNLLLCDEATSALDSKTTHS 176 Query: 184 IFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAELSLM 230 I LL + + + + +TH +++ K ++ + G + S+ Sbjct: 177 ILTLLSGIQKKFDLSIVFITHQIEVVKELCNQMCVISSGEIVERGSVE 224 >gi|57241114|ref|ZP_00369061.1| ABC transporter, ATP-binding protein [Campylobacter lari RM2100] gi|57018035|gb|EAL54810.1| ABC transporter, ATP-binding protein [Campylobacter lari RM2100] Length = 318 Score = 279 bits (716), Expect = 5e-74 Identities = 82/225 (36%), Positives = 130/225 (57%), Gaps = 6/225 (2%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ NL K Y + V+ +VS V EGE+ A+VG SG+GKSTLL + GL+ SG Sbjct: 1 MIKIQNLKKYYGKE----LVIDDVSLEVKEGEIYALVGHSGAGKSTLLRCINGLENYQSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124 V G+ + KL E R + +G I+Q L+ ENVAMPL I + I Sbjct: 57 SVEVFGKEIQKLKEKELREFR-KNIGMIFQHFALMSRKNVFENVAMPLEIHNFDKSTIQK 115 Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 R E+L VGL ++ P+ELSGG++QRVAIARAL NP+++L+DE T LD ++I Sbjct: 116 RVDELLDLVGLLAKSKAYPNELSGGQKQRVAIARALALNPKILLSDEATSALDPNTTNNI 175 Query: 185 FQLLGELNRLQGTAFLVVTHDLQLAKR-MSRQLEMRDGRLTAELS 228 +L+ ++N+ + ++VTH+++ K+ + + + G++ + Sbjct: 176 LELIAKINQEFNISVVLVTHEMEAVKQIAQKAVLLEHGQIIGQGK 220 >gi|2440008|gb|AAC45666.1| AbcC [Helicobacter pylori] Length = 327 Score = 278 bits (714), Expect = 9e-74 Identities = 77/228 (33%), Positives = 132/228 (57%), Gaps = 5/228 (2%) Query: 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTS 63 ++++ N+ K Y+ G L V+ + +G+++ ++G SG+GKSTL+ L+ L+ P+S Sbjct: 1 MVVELKNIEKIYENG---FHALKGVNLELKKGDILGVIGYSGAGKSTLIRLINCLERPSS 57 Query: 64 GDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIN 123 G+V+ NG + KL + R QK+G I+Q +LL ENVA L I + + +I Sbjct: 58 GEVLVNGVNLLKLKPKELQKAR-QKIGMIFQHFNLLSAKDVFENVAFALEIARWEKTKIK 116 Query: 124 SRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADS 183 SR E+L+ VGL+ + + P +LSGG+++RVAIAR+L N P L+L DE T LD++ S Sbjct: 117 SRVHELLELVGLEDKVHFYPKQLSGGQKERVAIARSLANCPDLLLCDEATSALDSKTTHS 176 Query: 184 IFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAELSLM 230 I LL + + + + +TH +++ K ++ + G + S+ Sbjct: 177 ILTLLSGIQKKLDLSVVFITHQIEVVKELCNQMCVISSGEIVERGSVE 224 >gi|57242092|ref|ZP_00370032.1| probable abc transporter ATP-binding protein peb1c [Campylobacter upsaliensis RM3195] gi|57017284|gb|EAL54065.1| probable abc transporter ATP-binding protein peb1c [Campylobacter upsaliensis RM3195] Length = 242 Score = 268 bits (689), Expect = 7e-71 Identities = 72/224 (32%), Positives = 119/224 (53%), Gaps = 9/224 (4%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ N+ K Y + VL +++ ++ EGE + I+G SGSGKST + + GL+ +SG Sbjct: 1 MIELKNVNKYYG----KHHVLKDINLTIKEGEKLVIIGPSGSGKSTTIRCMNGLEEVSSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGKKKPAEIN 123 +VI N ++ + + ++Q +L P + LEN+ + P+ + KK E Sbjct: 57 EVIINNLVLTHKNKIEIC---RKYCAMVFQHFNLYPHMSVLENLTLAPMKLQKKSRKEAE 113 Query: 124 SRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADS 183 A LK VGL +A P+ LSGG++QRVAIAR+L +L DEPT LD Sbjct: 114 ETAYHYLKVVGLVDKAKVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDPETIQE 173 Query: 184 IFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAE 226 + ++ +++ T +VVTH++ A+ R + M DG + E Sbjct: 174 VLDVMKKISHQSNTTMVVVTHEMGFAREVADRIIFMEDGAIVEE 217 >gi|57237750|ref|YP_178998.1| amino acid ABC transporter, ATP-binding protein PEB1 [Campylobacter jejuni RM1221] gi|57166554|gb|AAW35333.1| amino acid ABC transporter, ATP-binding protein PEB1 [Campylobacter jejuni RM1221] gi|6968359|emb|CAB73179.1| ABC-type amino-acid transporter ATP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|11277299|pir||A81366 ABC-type amino-acid transporter ATP-binding protein Cj0922c [imported] - Campylobacter jejuni (strain NCTC 11168) gi|15792251|ref|NP_282074.1| ABC-type amino-acid transporter ATP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|9297113|sp|P45677|PEB1C_CAMJE Probable ABC transporter ATP-binding protein PEB1C Length = 242 Score = 267 bits (686), Expect = 2e-70 Identities = 77/224 (34%), Positives = 120/224 (53%), Gaps = 9/224 (4%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ N+ K Y VL N++ SV EGE + I+G SGSGKST + + GL+ +SG Sbjct: 1 MIELKNVNKYYG----THHVLKNINLSVKEGEKLVIIGPSGSGKSTTIRCMNGLEEVSSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGKKKPAEIN 123 +V+ N ++ + + ++Q +L P T L+N+ + P+ + KK E Sbjct: 57 EVVVNNLVLNHKNKIEIC---RKYCAMVFQHFNLYPHMTVLQNLTLAPMKLQKKSKKEAE 113 Query: 124 SRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADS 183 A + LK VGL +AN P+ LSGG++QRVAIAR+L +L DEPT LD Sbjct: 114 ETAFKYLKVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDPETIQE 173 Query: 184 IFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAE 226 + ++ E++ T +VVTH++ AK R + M DG + E Sbjct: 174 VLDVMKEISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEE 217 >gi|57168777|ref|ZP_00367908.1| ABC transporter, ATP-binding protein [Campylobacter coli RM2228] gi|57019824|gb|EAL56507.1| ABC transporter, ATP-binding protein [Campylobacter coli RM2228] Length = 180 Score = 265 bits (680), Expect = 7e-70 Identities = 80/183 (43%), Positives = 118/183 (64%), Gaps = 4/183 (2%) Query: 41 VGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLP 100 +G SGSGKSTLL++L +D P+SG I + + + +++ K LR +K+G I+Q HL+P Sbjct: 1 MGPSGSGKSTLLNILSLMDDPSSGKYILDNEDLEQINEEQKITLRREKIGLIFQQFHLIP 60 Query: 101 DFTALENVAMPLLIGKKKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARAL 160 +ALENV + + A +L+ VGL HR +H PS+LSGGE+QRV IARAL Sbjct: 61 YLSALENVMLSQYYH---SSVDEEDAKAVLEKVGLSHRLSHLPSQLSGGEQQRVCIARAL 117 Query: 161 VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRD 220 +NNP ++LADEPTGNLD N + + L +L + +G +++TH+ +LAK R L ++ Sbjct: 118 INNPEILLADEPTGNLDEANEKIVLETLQKL-KNEGKTIVLITHNPELAKFADRTLILQH 176 Query: 221 GRL 223 G L Sbjct: 177 GIL 179 >gi|34556714|ref|NP_906529.1| AMINO ACID PERMEASE ATP-BINDING PROTEIN [Wolinella succinogenes DSM 1740] gi|34482428|emb|CAE09429.1| AMINO ACID PERMEASE ATP-BINDING PROTEIN [Wolinella succinogenes] Length = 246 Score = 263 bits (674), Expect = 4e-69 Identities = 77/230 (33%), Positives = 133/230 (57%), Gaps = 9/230 (3%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M++ ++Q N+ K + + L+NV+FSV +GE++ + G SGSGKSTL+ + L+ Sbjct: 1 MSQKIVQMTNVHKYFGD----FHALNNVNFSVRKGEIVVVCGPSGSGKSTLIRCINALEE 56 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLL-IGKKKP 119 GD+I +GQ + S ++R++ +G ++Q +L P T LEN+++ + + Sbjct: 57 IDEGDIIIDGQNLYDRS-TDINKIRSE-VGMVFQHFNLFPHLTILENISIAQIKVKGLSK 114 Query: 120 AEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDAR 179 E ++ ++E+LK V L+H+A P+ELSGG++QRVAIAR + P++VL DEPT LD Sbjct: 115 KEADANSMEILKKVQLEHKAQGYPNELSGGQKQRVAIARTVAMKPKVVLFDEPTSALDPE 174 Query: 180 NADSIFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAELS 228 + ++ +L R + VTH++ AK R + M G + + + Sbjct: 175 MIGEVLDVMRQLAREH-YTLVCVTHEMGFAKEVSDRIIFMDHGVIMEDTT 223 >gi|1072932|pir||C48518 ABC-type transport protein (PEB1 5' region) - Campylobacter jejuni gi|388564|gb|AAA02918.1| major cell-binding factor receptor Length = 242 Score = 261 bits (671), Expect = 9e-69 Identities = 76/224 (33%), Positives = 118/224 (52%), Gaps = 9/224 (4%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ N+ K Y VL + SV EGE + I+G SGSGKST + + GL+ +SG Sbjct: 1 MIELKNVNKYYG----THHVLKIFNLSVKEGEKLVIIGPSGSGKSTTIRCMNGLEEVSSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGKKKPAEIN 123 +V+ N ++ + + ++Q +L P T L+N+ + P+ + KK E Sbjct: 57 EVVVNNLVLNHKNKIEIC---RKYCAMVFQHFNLYPHMTVLQNLTLAPMKLQKKSKKEAE 113 Query: 124 SRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADS 183 A + LK VGL +AN P+ LSGG++QRVAIAR+L +L DEPT LD Sbjct: 114 ETAFKYLKVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDPETIQE 173 Query: 184 IFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAE 226 + ++ E++ T +VVTH++ AK R + M DG + E Sbjct: 174 VLDVMKEISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEE 217 >gi|57237619|ref|YP_178867.1| ABC transporter, ATP-binding protein [Campylobacter jejuni RM1221] gi|57166423|gb|AAW35202.1| ABC transporter, ATP-binding protein [Campylobacter jejuni RM1221] gi|6968220|emb|CAB73039.1| ABC transport system ATP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|11278930|pir||F81348 ABC transport system ATP-binding protein Cj0774c [imported] - Campylobacter jejuni (strain NCTC 11168) gi|15792112|ref|NP_281935.1| ABC transport system ATP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 336 Score = 259 bits (665), Expect = 5e-68 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 21/237 (8%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ NL K Y + V+++VS + +GE+ AIVG SG+GKSTLL + GL+ G Sbjct: 1 MIKIKNLKKYYGKE----LVINDVSLEIKKGEIYAIVGHSGAGKSTLLRCINGLENYQEG 56 Query: 65 DVIFNGQPMSKLSSAAKAELR--NQKLGFIYQFHHLLPDFTALENVAMPL---------- 112 + Q + LS ELR + +G I+Q L+ ENVAMPL Sbjct: 57 SLKVFDQEIKDLSQKKSKELRMLRKDIGMIFQNFALMERKNVFENVAMPLRTHYTQCKFH 116 Query: 113 --LIGK--KKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVL 168 L K EI + +L+ VGLDH+ P ELSGG++QRVAIARAL NP+++L Sbjct: 117 AKLFNKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQRVAIARALALNPKILL 176 Query: 169 ADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLT 224 +DE T LD +I +L+ ++N G ++VTH++ + K + L + G++ Sbjct: 177 SDEATSALDPNTTKNILELISKINAEFGITVVLVTHEMDVVKDIAQKALLLEHGQII 233 >gi|57167770|ref|ZP_00366910.1| ABC transporter, ATP-binding protein [Campylobacter coli RM2228] gi|57020892|gb|EAL57556.1| ABC transporter, ATP-binding protein [Campylobacter coli RM2228] Length = 336 Score = 250 bits (642), Expect = 2e-65 Identities = 80/237 (33%), Positives = 127/237 (53%), Gaps = 21/237 (8%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ NL K Y + V+++VS + +GE+ AIVG SG+GKSTLL + GL++ G Sbjct: 1 MIKIQNLKKYYGKE----LVINDVSLEIKKGEIYAIVGHSGAGKSTLLRCINGLESYQEG 56 Query: 65 DVIFNGQPMSKLSSAAKAELR--NQKLGFIYQFHHLLPDFTALENVAMPL--------LI 114 + + LS +LR + +G I+Q L+ ENVAMPL + Sbjct: 57 SLKVLDAEIKDLSQNNPKKLRMLRKDIGMIFQNFALMERKNVFENVAMPLRMHYSQCKIY 116 Query: 115 GK------KKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVL 168 K ++N + +L VGLDH+ P ELSGG++QRVAIARAL NP+++L Sbjct: 117 SKLFGKEYMSEKDLNQKVNSLLDVVGLDHKNKAYPRELSGGQKQRVAIARALTLNPKILL 176 Query: 169 ADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLT 224 +DE T LD +I +L+ ++N G ++VTH++ + K + L + G++ Sbjct: 177 SDEATSALDPNTTKNILELIAKINAEFGITVVLVTHEMDVVKDVAQKALLLEHGQII 233 >gi|34558234|ref|NP_908049.1| ABC TRANSPORT ATP-BINDING PROTEIN [Wolinella succinogenes DSM 1740] gi|34483953|emb|CAE10949.1| ABC TRANSPORT ATP-BINDING PROTEIN [Wolinella succinogenes] Length = 303 Score = 249 bits (640), Expect = 3e-65 Identities = 73/202 (36%), Positives = 112/202 (55%), Gaps = 2/202 (0%) Query: 25 LHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 L +S + +G + +VG SG+GKSTLL + GL+ G++ +G + L A Sbjct: 2 LDQISLEIPKGTIYGLVGHSGAGKSTLLRTINGLEGFDEGELWVDGVDLQSLQGDALRVF 61 Query: 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLKAVGLDHRANHRPS 144 R + +G I+Q L+ ENVA+PL K AEI R +L VGL+ +++ PS Sbjct: 62 R-KNIGMIFQHFSLMARQNVFENVALPLRCWKYPEAEIQKRVFNLLSLVGLESKSDSYPS 120 Query: 145 ELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTH 204 LSGG++QRVAIARAL P+++L+DE T LD SI LL +N+ G ++VTH Sbjct: 121 ALSGGQKQRVAIARALTLEPQILLSDEATSALDPSMTQSILDLLQTINQELGVTVVLVTH 180 Query: 205 DLQLAKR-MSRQLEMRDGRLTA 225 ++++ K+ + G+L Sbjct: 181 EMEVVKKLCHHAAFLEGGKLLR 202 >gi|57505383|ref|ZP_00371311.1| ABC transporter, ATP-binding protein [Campylobacter upsaliensis RM3195] gi|57016208|gb|EAL52994.1| ABC transporter, ATP-binding protein [Campylobacter upsaliensis RM3195] Length = 335 Score = 249 bits (638), Expect = 6e-65 Identities = 75/237 (31%), Positives = 129/237 (54%), Gaps = 21/237 (8%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ NL K Y + V+++VS + +GE+ AIVG SG+GKSTLL + GL++ G Sbjct: 1 MIKIQNLQKYYGKE----LVINDVSLEIKKGEIYAIVGHSGAGKSTLLRCINGLESYQKG 56 Query: 65 DVIFNGQPMSKLSSAAKAELR--NQKLGFIYQFHHLLPDFTALENVAMPL--------LI 114 + + L +L+ + +G I+Q L+ EN+AMPL ++ Sbjct: 57 SLKVFDLEIKDLLENEPEKLKGLRKDVGMIFQNFALMNRKNVFENIAMPLRTHYTQCKIM 116 Query: 115 GK------KKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVL 168 ++ R E+L VGL H+ N P ELSGG++QR+AIARAL NP+++L Sbjct: 117 ASLFKKDYMSEDDVKKRIDELLDIVGLSHKKNSYPKELSGGQKQRIAIARALALNPKILL 176 Query: 169 ADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLT 224 +DE T LD +I +L+ ++N+ G + ++VTH++++ K + + + G++ Sbjct: 177 SDEATSALDPNTTKNILELILKINKEFGISVVLVTHEMEVVKDIAQKAVLLEQGQII 233 >gi|57241071|ref|ZP_00369018.1| amino acid ABC transporter, ATP-binding protein [Campylobacter lari RM2100] gi|57017992|gb|EAL54767.1| amino acid ABC transporter, ATP-binding protein [Campylobacter lari RM2100] Length = 242 Score = 249 bits (638), Expect = 6e-65 Identities = 75/225 (33%), Positives = 127/225 (56%), Gaps = 9/225 (4%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ +NL K+Y + +VL ++S V +G+++AI+G SG GKST L L L+TP SG Sbjct: 1 MIKIENLVKKYGD----LEVLKDISVEVHKGDIIAIIGPSGGGKSTFLRCLNKLETPDSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGKKKPAEIN 123 ++ N + L + A QK+ ++Q +L + LEN+ + P+ E Sbjct: 57 NIYINDVNV--LDNKADINQIRQKVSMVFQHFNLFNNKNVLENLCLAPVQTKIMSKDEAI 114 Query: 124 SRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADS 183 +A ++L+ VGL + N+ P +LSGG++QR+AIAR+L+ NP ++L DEPT LD Sbjct: 115 KKARKLLEKVGLSDKENYFPHKLSGGQKQRIAIARSLMMNPDVILFDEPTSALDPEMIGE 174 Query: 184 IFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAEL 227 + ++ E+ + G LVVTH++ A+ +R M G + + Sbjct: 175 VLNIMKEVAKE-GLTMLVVTHEMGFARNVANRIFFMDKGIIAVDE 218 >gi|6967940|emb|CAB75107.1| amino-acid ABC transporter ATP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|11277300|pir||H81391 amino-acid ABC transporter ATP-binding protein Cj0469 [imported] - Campylobacter jejuni (strain NCTC 11168) gi|15791833|ref|NP_281656.1| amino-acid ABC transporter ATP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 253 Score = 246 bits (631), Expect = 4e-64 Identities = 73/228 (32%), Positives = 123/228 (53%), Gaps = 11/228 (4%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M+ +L+ +NL K Y L +++ V E++ I+G SG GKSTLL + GL+ Sbjct: 1 MS--ILKIENLQKYYGS----HHALKDINLEVKAKEVVVILGPSGCGKSTLLRCINGLEE 54 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGKKKP 119 SG++ + + + K +R QK+G ++Q + L + EN+ + P+ + K+K Sbjct: 55 IASGNIYIDNEKIDK-DFKEWPRMR-QKVGMVFQSYELFEHLSVEENILLGPMKVQKRKK 112 Query: 120 AEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDAR 179 E+ A L+ VGL H+ + P ELSGG++QR+AI R+L NP L+L DE T LD Sbjct: 113 DEVLKEAKIWLEKVGLLHKIHAYPRELSGGQKQRIAIVRSLCMNPELMLFDEVTAALDPE 172 Query: 180 NADSIFQLLGELNRLQGTAFLVVTHDLQLA-KRMSRQLEMRDGRLTAE 226 + +++ L + G L+VTH++ A + + M +G++ E Sbjct: 173 IVREVLEVMLNLAKE-GMTMLIVTHEMGFAKAVADKIIFMDEGKIIEE 219 >gi|57237523|ref|YP_178537.1| amino acid ABC transporter, ATP-binding protein [Campylobacter jejuni RM1221] gi|57166327|gb|AAW35106.1| amino acid ABC transporter, ATP-binding protein [Campylobacter jejuni RM1221] Length = 245 Score = 246 bits (630), Expect = 6e-64 Identities = 73/228 (32%), Positives = 124/228 (54%), Gaps = 11/228 (4%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M+ +L+ +NL K Y L +++ V + E++ I+G SG GKSTLL + GL+ Sbjct: 1 MS--ILKIENLQKYYGS----HHALKDINLEVKDKEVVVILGPSGCGKSTLLRCINGLEE 54 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGKKKP 119 SG++ + + + K +R QK+G ++Q + L + EN+ + P+ + K+K Sbjct: 55 IASGNIYIDNEKIDK-DFKEWPRMR-QKVGMVFQSYELFEHLSVEENILLGPMKVQKRKK 112 Query: 120 AEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDAR 179 E+ A L+ VGL H+ + P ELSGG++QR+AI R+L NP L+L DE T LD Sbjct: 113 DEVLQEAKIWLEKVGLLHKIHAYPRELSGGQKQRIAIVRSLCMNPELMLFDEVTAALDPE 172 Query: 180 NADSIFQLLGELNRLQGTAFLVVTHDLQLA-KRMSRQLEMRDGRLTAE 226 + +++ L + G L+VTH++ A + + M +G++ E Sbjct: 173 IVREVLEVMLNLAKE-GMTMLIVTHEMGFAKAVADKIIFMDEGKIIEE 219 >gi|57241162|ref|ZP_00369109.1| glutamine ABC transporter, ATP-binding protein (glnQ) [Campylobacter lari RM2100] gi|57018083|gb|EAL54858.1| glutamine ABC transporter, ATP-binding protein (glnQ) [Campylobacter lari RM2100] Length = 245 Score = 242 bits (621), Expect = 5e-63 Identities = 73/227 (32%), Positives = 119/227 (52%), Gaps = 11/227 (4%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M+ +L+ NL K Y VL +++ V + E++ I+G SG GKSTLL + GL+ Sbjct: 1 MS--ILKIQNLQKYYDN----HHVLKDINLEVSQKEVVVILGPSGCGKSTLLRCINGLEE 54 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGKKKP 119 G + + + + K + ++R QK+G ++Q + L +N+ + PL + K+K Sbjct: 55 MADGAIFVDDEKIDK-NYKNWTQIR-QKIGMVFQSYELFDHLNVEQNILLGPLKVQKRKK 112 Query: 120 AEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDAR 179 E+ A L VGL H+ P ELSGG++QR+AI R+L NP ++L DE T LD Sbjct: 113 EEVLEEAKYWLDRVGLLHKLKAYPKELSGGQKQRIAIVRSLCMNPEIMLFDEVTAALDPE 172 Query: 180 NADSIFQLLGELNRLQGTAFLVVTHDLQLA-KRMSRQLEMRDGRLTA 225 + ++ L + G L+VTH++ A R + M DG++ Sbjct: 173 IVREVLDVILNLAKD-GMTMLIVTHEMGFAKAVADRIVFMDDGKIVE 218 >gi|57505195|ref|ZP_00371127.1| glutamine/glutamate ABC transporter, ATP-binding protein [Campylobacter coli RM2228] gi|57019027|gb|EAL55757.1| glutamine/glutamate ABC transporter, ATP-binding protein [Campylobacter coli RM2228] Length = 245 Score = 239 bits (613), Expect = 4e-62 Identities = 75/233 (32%), Positives = 121/233 (51%), Gaps = 11/233 (4%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M+ +L+ NL K Y L N++ V + E++ I+G SG GKSTLL + GL+ Sbjct: 1 MS--ILKIKNLQKYYGF----HHALKNINLEVKQKEVVVILGPSGCGKSTLLRCINGLEE 54 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGKKKP 119 G + GQ + +R QK+G ++Q + L + +N+ + PL + K+ Sbjct: 55 IADGVIEI-GQDKIDKNFKDWTRVR-QKVGMVFQSYELFEHLSVKDNILLGPLKVQKRAK 112 Query: 120 AEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDAR 179 E+ A L+ VGL H+ + P ELSGG++QR+AI R+L NP L+L DE T LD Sbjct: 113 EEVLQEAKIWLEKVGLAHKIDAYPKELSGGQKQRIAIVRSLCMNPELMLFDEVTAALDPE 172 Query: 180 NADSIFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAELSLMG 231 + +++ L + G L+VTH++ A+ R + M +G + E + G Sbjct: 173 IVREVLEVILNLAKD-GMTMLIVTHEMGFARAVADRIIFMDNGEIIEENTPDG 224 >gi|34556821|ref|NP_906636.1| ABC-TYPE TRANSPORTER, ATPASE COMPONENT [Wolinella succinogenes DSM 1740] gi|34482536|emb|CAE09536.1| ABC-TYPE TRANSPORTER, ATPASE COMPONENT [Wolinella succinogenes] Length = 225 Score = 238 bits (611), Expect = 8e-62 Identities = 87/221 (39%), Positives = 127/221 (57%), Gaps = 4/221 (1%) Query: 6 LQCDNLCKRYQEGS-VQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 + + + K Y G L V V +GE++ + G SGSGKSTLL L+GGL PT G Sbjct: 4 IVVNGVSKVYHAGKANAFFALKKVHLEVEKGEVVILKGVSGSGKSTLLSLIGGLSKPTEG 63 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124 +++ G ++KL + R++ +GFI+Q +LL T +NV PL + + + AEI Sbjct: 64 EILVEGHNIAKLPDVMSSSYRHKSVGFIFQSFNLLAGLTVYQNVMAPLGLTQLRGAEIEE 123 Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 R L +DH+ + + ELSGGERQR AIARA+V NP ++LADEPT NLDA+N+ + Sbjct: 124 RIHWALGVACIDHKKHQKVGELSGGERQRCAIARAIVMNPAMILADEPTANLDAQNSLAF 183 Query: 185 FQLLGELNRLQGTAFLVVTHDL--QLAKRMSRQLEMRDGRL 223 ++L + G + L+ THD + R L MRDG + Sbjct: 184 VEILKSF-KQMGKSVLIATHDPLFDEVGEVDRSLMMRDGEI 223 >gi|57237731|ref|YP_178979.1| amino acid ABC transporter, ATP-binding protein [Campylobacter jejuni RM1221] gi|57166535|gb|AAW35314.1| amino acid ABC transporter, ATP-binding protein [Campylobacter jejuni RM1221] Length = 242 Score = 234 bits (600), Expect = 2e-60 Identities = 69/226 (30%), Positives = 125/226 (55%), Gaps = 9/226 (3%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ NL K+Y + +VL N++ ++ +G+++AI+G SG GKST L + L+ SG Sbjct: 1 MIEVKNLQKKYG----ELEVLKNINTTISKGDVIAIIGPSGGGKSTFLRCINRLELADSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKK-KPAEIN 123 +++ N Q + ++R QK+ ++Q +L + +EN+ + + E Sbjct: 57 EILINKQNILD-KEIDINKIR-QKISMVFQHFNLFANKNVMENLCLTPIKTGILSQEEAI 114 Query: 124 SRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADS 183 +A +L VGL + N P +LSGG++QR+AIAR+L+ NP ++L DEPT LD Sbjct: 115 KKAKLLLAKVGLADKENIMPHKLSGGQKQRIAIARSLMMNPDVILFDEPTSALDPEMIGE 174 Query: 184 IFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAELS 228 + ++ ++ + G LVVTH++ A+ +R M G++ + S Sbjct: 175 VLSIMKDVAKE-GLTMLVVTHEMGFARNVANRIFFMDKGKIAVDAS 219
Score E Sequences producing significant alignments: (bits) Value gi|34557766|ref|NP_907581.1| PROBABLE TRANSMEMBRANE ATP-BIN... 345 5e-94 gi|32263409|gb|AAP78454.1| ABC transporter [Helicobacter he... 333 3e-90 gi|6968074|emb|CAB75243.1| ABC-type transmembrane transport... 323 3e-87 gi|57238197|ref|YP_178722.1| macrolide-specific efflux prot... 322 4e-87 gi|57242014|ref|ZP_00369954.1| ABC transporter, ATP-binding... 320 1e-86 gi|57167636|ref|ZP_00366776.1| ABC transporter, ATP-binding... 316 3e-85 gi|57240328|ref|ZP_00368277.1| ABC transporter, ATP-binding... 314 1e-84 gi|6969079|emb|CAB73650.1| putative ABC transport system AT... 308 8e-83 gi|57238674|ref|YP_179805.1| ABC transporter, ATP-binding p... 306 2e-82 gi|57240579|ref|ZP_00368528.1| ABC transporter, ATP-binding... 301 9e-81 gi|34557887|ref|NP_907702.1| ABC TRANSPORT PROTEIN [Wolinel... 296 2e-79 gi|32262265|gb|AAP77313.1| conserved hypothetical protein [... 292 6e-78 gi|2314761|gb|AAD08616.1| ABC transporter, ATP-binding prot... 286 4e-76 gi|15612549|ref|NP_224202.1| abc transporter, ATP-binding p... 282 6e-75 gi|57241114|ref|ZP_00369061.1| ABC transporter, ATP-binding... 279 5e-74 gi|2440008|gb|AAC45666.1| AbcC [Helicobacter pylori] 278 9e-74 gi|57242092|ref|ZP_00370032.1| probable abc transporter ATP... 268 7e-71 gi|57237750|ref|YP_178998.1| amino acid ABC transporter, AT... 267 2e-70 gi|57168777|ref|ZP_00367908.1| ABC transporter, ATP-binding... 265 7e-70 gi|34556714|ref|NP_906529.1| AMINO ACID PERMEASE ATP-BINDIN... 263 4e-69 gi|1072932|pir||C48518 ABC-type transport protein (PEB1 5' ... 261 9e-69 gi|57237619|ref|YP_178867.1| ABC transporter, ATP-binding p... 259 5e-68 gi|57167770|ref|ZP_00366910.1| ABC transporter, ATP-binding... 250 2e-65 gi|34558234|ref|NP_908049.1| ABC TRANSPORT ATP-BINDING PROT... 249 3e-65 gi|57505383|ref|ZP_00371311.1| ABC transporter, ATP-binding... 249 6e-65 gi|57241071|ref|ZP_00369018.1| amino acid ABC transporter, ... 249 6e-65 gi|6967940|emb|CAB75107.1| amino-acid ABC transporter ATP-b... 246 4e-64 gi|57237523|ref|YP_178537.1| amino acid ABC transporter, AT... 246 6e-64 gi|57241162|ref|ZP_00369109.1| glutamine ABC transporter, A... 242 5e-63 gi|57505195|ref|ZP_00371127.1| glutamine/glutamate ABC tran... 239 4e-62 gi|34556821|ref|NP_906636.1| ABC-TYPE TRANSPORTER, ATPASE C... 238 8e-62 gi|57237731|ref|YP_178979.1| amino acid ABC transporter, AT... 234 2e-60
>gi|34557766|ref|NP_907581.1| PROBABLE TRANSMEMBRANE ATP-BINDING ABC TRANSPORTER PROTEIN [Wolinella succinogenes DSM 1740] gi|34483483|emb|CAE10481.1| PROBABLE TRANSMEMBRANE ATP-BINDING ABC TRANSPORTER PROTEIN [Wolinella succinogenes] Length = 643 Score = 345 bits (888), Expect = 5e-94 Identities = 97/225 (43%), Positives = 150/225 (66%), Gaps = 1/225 (0%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M K L++ + + + G + +VL + + GE +AI+G+SGSGKSTL+++LG LD Sbjct: 1 MQKPLIELKGVSRVFNLGGLAVEVLKGIDLQIYPGEFVAIMGASGSGKSTLMNILGCLDR 60 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPA 120 P+ G+ +F G+ +S L A+LR ++ GFI+Q +HL+ A ENV +P + Sbjct: 61 PSQGEYLFRGESVSLLHRDDLAQLRREEFGFIFQSYHLIHALDARENVEVPAIYAGAGIV 120 Query: 121 EINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARN 180 E RA E+L ++GL R +HRPS+LSGG++QRV+IARAL+N R++LADEPTG LD+R+ Sbjct: 121 EREKRAEELLGSLGLGERLHHRPSQLSGGQQQRVSIARALMNGGRVILADEPTGALDSRS 180 Query: 181 ADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTA 225 + + QLL EL+R QG +++THD +A +R +EM+DG++T Sbjct: 181 GEEVMQLLMELSR-QGHTIILITHDSHVASHANRVIEMKDGQITH 224
>gi|32263409|gb|AAP78454.1| ABC transporter [Helicobacter hepaticus ATCC 51449] gi|32267356|ref|NP_861388.1| ABC transporter [Helicobacter hepaticus ATCC 51449] Length = 229 Score = 333 bits (857), Expect = 3e-90 Identities = 94/223 (42%), Positives = 138/223 (61%) Query: 6 LQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGD 65 ++ N+ K Y +G + L V + +GE +A++G SGSGKS+L ++LG LD +SG+ Sbjct: 5 IKLHNVRKTYGKGESAFEALKGVDLLIDKGEFVALMGPSGSGKSSLANILGTLDVGSSGE 64 Query: 66 VIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSR 125 F + +L+ +A LR +GFI+Q +LL TALENV +PL+ K E Sbjct: 65 YWFYDVNVFELTQNQRALLRRNYIGFIFQGFNLLARTTALENVELPLMYRGVKKTEREEI 124 Query: 126 ALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIF 185 AL+ L VGL A+H ++LSGG++QRVAIARA+ + P +LADEPTGNLD + + I Sbjct: 125 ALKALDKVGLKDWASHTSAKLSGGQQQRVAIARAIASEPLFLLADEPTGNLDTKRSVEIM 184 Query: 186 QLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 ++L ELN+ G L+VTH+ +AK SR+L DGRL ++ Sbjct: 185 EILQELNQNLGITILMVTHEPDMAKYASRELHFLDGRLISDSK 227
>gi|6968074|emb|CAB75243.1| ABC-type transmembrane transport protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|11278932|pir||F81408 ABC-type transmembrane transport protein Cj0607 [imported] - Campylobacter jejuni (strain NCTC 11168) gi|15791967|ref|NP_281790.1| ABC-type transmembrane transport protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 641 Score = 323 bits (830), Expect = 3e-87 Identities = 93/229 (40%), Positives = 155/229 (67%), Gaps = 5/229 (2%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 ++ N+CK E + +L NVS S+ +GE +AI+G SGSGK++LL+++G LDTP+SG Sbjct: 1 MIFLKNICKNIGENA----ILKNVSLSIEKGEFVAIIGQSGSGKTSLLNIIGTLDTPSSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124 +F+ ++KL++ KA LR +K+GFI+Q ++LL +A ENV++P + K E + Sbjct: 57 TYVFDEYEVTKLNNDEKARLRREKIGFIFQRYNLLSLLSAKENVSLPAVYAGKNLQERSQ 116 Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 A ++L + L H+ + +P+ELSGG++QRV+IARAL+N L+LADEPTG LD+++ + Sbjct: 117 NAKKLLNDLELAHKLDSKPNELSGGQQQRVSIARALINGGELILADEPTGALDSKSGIMV 176 Query: 185 FQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE 233 ++L +LN QG ++VTHD ++A + R +E++DG + ++ A+ Sbjct: 177 LEILQKLN-EQGHTIVLVTHDPKIAAQAKRVIEIKDGEILSDTKKEKAQ 224
>gi|57238197|ref|YP_178722.1| macrolide-specific efflux protein macB [Campylobacter jejuni RM1221] gi|57167001|gb|AAW35780.1| macrolide-specific efflux protein macB [Campylobacter jejuni RM1221] Length = 641 Score = 322 bits (829), Expect = 4e-87 Identities = 93/229 (40%), Positives = 155/229 (67%), Gaps = 5/229 (2%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 ++ N+CK E + +L NVS S+ +GE +AI+G SGSGK++LL+++G LDTP+SG Sbjct: 1 MIFLKNICKNIGENA----ILKNVSLSIEKGEFVAIIGQSGSGKTSLLNIIGTLDTPSSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124 +F+ ++KL++ KA LR +K+GFI+Q ++LL +A ENV++P + K E + Sbjct: 57 TYVFDEYEVTKLNNDEKARLRREKIGFIFQRYNLLSLLSAKENVSLPAVYAGKNLQERSQ 116 Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 A ++L + L H+ + +P+ELSGG++QRV+IARAL+N L+LADEPTG LD+++ + Sbjct: 117 NAKKLLNDLELAHKLDSKPNELSGGQQQRVSIARALINGGELILADEPTGALDSKSGIMV 176 Query: 185 FQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE 233 ++L +LN QG ++VTHD ++A + R +E++DG + ++ A+ Sbjct: 177 LEILQKLN-EQGHTIVLVTHDPKIAAQAKRVIEIKDGEILSDTKKEKAQ 224
>gi|57242014|ref|ZP_00369954.1| ABC transporter, ATP-binding protein [Campylobacter upsaliensis RM3195] gi|57017206|gb|EAL53987.1| ABC transporter, ATP-binding protein [Campylobacter upsaliensis RM3195] Length = 641 Score = 320 bits (824), Expect = 1e-86 Identities = 88/228 (38%), Positives = 149/228 (65%), Gaps = 5/228 (2%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ +N+ K+ + +L ++ + +GE +AI+G SGSGK++LL+++G LD P+ G Sbjct: 1 MIKLENISKKIGQN----TILKQINLQIEKGEFVAIIGQSGSGKTSLLNIIGTLDEPSGG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124 F ++ L+ KA LR +K+GFI+Q ++LLP +A ENV++P + KK E N Sbjct: 57 RFFFENYEVTNLNKDEKARLRREKIGFIFQRYNLLPLLSAKENVSLPSVYAGKKSEERNQ 116 Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 RA +L+ + L H+ N +P+ELSGG++QRV+IARAL+N L+LADEPTG LD+++ + Sbjct: 117 RATNLLENLELSHKMNSKPNELSGGQQQRVSIARALMNGGELILADEPTGALDSKSGVMV 176 Query: 185 FQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGA 232 ++L +LN QG ++VTHD ++A + R +E++DG + ++ Sbjct: 177 LEILQKLN-TQGHTIILVTHDPKIAAKAGRVIEIKDGEILSDTKQNSK 223
>gi|57167636|ref|ZP_00366776.1| ABC transporter, ATP-binding protein [Campylobacter coli RM2228] gi|57020758|gb|EAL57422.1| ABC transporter, ATP-binding protein [Campylobacter coli RM2228] Length = 641 Score = 316 bits (813), Expect = 3e-85 Identities = 96/226 (42%), Positives = 155/226 (68%), Gaps = 5/226 (2%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 ++ +N+CK E + +L NVS S+ +GE +AI+G SGSGK++LL+++G LD P+SG Sbjct: 1 MIFLNNICKNIGENA----ILKNVSLSIEKGEFVAIIGQSGSGKTSLLNIIGTLDEPSSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124 IF+ +++L+S KA LR +K+GFI+Q ++LL +A +NVA+P + KK E N Sbjct: 57 SYIFDDYEVTQLNSDEKARLRREKIGFIFQRYNLLNLLSANDNVALPAVYAGKKVQERNF 116 Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 RA E+L + L+H+ +P+ELSGG++QRV+IARAL+N L+LADEPTG LD+++ + Sbjct: 117 RAQELLGNLELEHKIESKPNELSGGQQQRVSIARALMNGGELILADEPTGALDSKSGIMV 176 Query: 185 FQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLM 230 ++L +LN QG ++VTHD ++A + R +E++DG + ++ Sbjct: 177 LEILKKLN-TQGHTIVLVTHDPKIAAQAKRVIEIKDGEILSDSKKD 221
>gi|57240328|ref|ZP_00368277.1| ABC transporter, ATP-binding protein [Campylobacter lari RM2100] gi|57018669|gb|EAL55442.1| ABC transporter, ATP-binding protein [Campylobacter lari RM2100] Length = 643 Score = 314 bits (807), Expect = 1e-84 Identities = 87/222 (39%), Positives = 148/222 (66%), Gaps = 5/222 (2%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ +N+ K T +L N++ + +GE +AI+G SGSGK++LL+++G LD P+SG Sbjct: 1 MIRLENIQK----KINNTTILENINLYIQKGEFVAIIGQSGSGKTSLLNIIGTLDEPSSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124 + ++ L+ KA +R +K+GFI+Q ++LL A +NVA+P + K E + Sbjct: 57 KYFLDAYEVTNLNKDEKARIRREKIGFIFQRYNLLSLLNAKDNVALPAVYAGKNKHERSQ 116 Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 +A E+L + LDH+ +P+ELSGG++QRV+IARAL+N L+LADEPTG LD+++ + Sbjct: 117 KAKELLSFLELDHKELSKPNELSGGQQQRVSIARALMNGGELILADEPTGALDSKSGKIV 176 Query: 185 FQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAE 226 ++L +LN QG ++VTHD ++A R R +E++DG++ ++ Sbjct: 177 LEILNKLN-EQGHTVVLVTHDREIAARAKRVIEIKDGKIISD 217
>gi|6969079|emb|CAB73650.1| putative ABC transport system ATP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|11277319|pir||D81263 probable ABC transport system ATP-binding protein Cj1663 [imported] - Campylobacter jejuni (strain NCTC 11168) gi|15792967|ref|NP_282790.1| putative ABC transport system ATP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 217 Score = 308 bits (792), Expect = 8e-83 Identities = 97/223 (43%), Positives = 140/223 (62%), Gaps = 8/223 (3%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M K L++ +NL K + + L+N++ SV EGE +AI+G SGSGKSTLL++L +DT Sbjct: 2 MKKELIKINNLNKEFG----KVKALNNINLSVYEGEWLAIMGPSGSGKSTLLNILSLMDT 57 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPA 120 P+SG+ I + + + ++ K LR +K+G ++Q HL+P ALENV + + Sbjct: 58 PSSGEYILDNENLEQMDEEQKITLRREKIGLVFQQFHLIPYLNALENVMLSQYYH---SS 114 Query: 121 EINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARN 180 A +L+ VGL HR H PS+LSGGE+QRV IARAL+NNP L+LADEPTGNLD N Sbjct: 115 VDEEDAKMVLEKVGLSHRLTHLPSQLSGGEQQRVCIARALINNPELLLADEPTGNLDEAN 174 Query: 181 ADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRL 223 + Q L +L + +G +++TH+ LAK R L ++ G L Sbjct: 175 EQIVLQTLQKL-KNEGKTIVLITHNPDLAKFADRTLILQHGVL 216
>gi|57238674|ref|YP_179805.1| ABC transporter, ATP-binding protein [Campylobacter jejuni RM1221] gi|57167478|gb|AAW36257.1| ABC transporter, ATP-binding protein [Campylobacter jejuni RM1221] Length = 217 Score = 306 bits (788), Expect = 2e-82 Identities = 96/223 (43%), Positives = 139/223 (62%), Gaps = 8/223 (3%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M K L++ +NL K + + L+N++ SV EGE +AI+G SGSGKSTLL++L +D Sbjct: 2 MKKELIKINNLNKEFG----KVKALNNINLSVYEGEWLAIMGPSGSGKSTLLNILSLMDA 57 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPA 120 P+SG+ I + + + ++ K LR +K+G ++Q HL+P ALENV + + Sbjct: 58 PSSGEYILDNENLEQMDEEQKITLRREKIGLVFQQFHLIPYLNALENVMLSQYYH---SS 114 Query: 121 EINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARN 180 A +L+ VGL HR H PS+LSGGE+QRV IARAL+NNP L+LADEPTGNLD N Sbjct: 115 VDEEDAKMVLEKVGLSHRLTHLPSQLSGGEQQRVCIARALINNPELLLADEPTGNLDEAN 174 Query: 181 ADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRL 223 + Q L +L + +G +++TH+ LAK R L ++ G L Sbjct: 175 EQIVLQTLQKL-KNEGKTIVLITHNPDLAKFADRTLILQHGVL 216
>gi|57240579|ref|ZP_00368528.1| ABC transporter, ATP-binding protein [Campylobacter lari RM2100] gi|57018920|gb|EAL55693.1| ABC transporter, ATP-binding protein [Campylobacter lari RM2100] Length = 218 Score = 301 bits (774), Expect = 9e-81 Identities = 88/224 (39%), Positives = 135/224 (60%), Gaps = 8/224 (3%) Query: 3 KILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT 62 K +++ NL + + + L N++ V +GE +AI+G SGSGKSTLL++L +DT + Sbjct: 2 KNIIKISNLNRNF----NEVKALQNINLEVKQGEWLAIMGPSGSGKSTLLNILSLMDTQS 57 Query: 63 SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEI 122 SG+ + + + LS K+ +R +K+G I+Q HL+P ALENV + + Sbjct: 58 SGEYFLDDKEVGNLSEEEKSVIRREKIGLIFQQFHLIPYLNALENVMLAQFYH---SSIE 114 Query: 123 NSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNAD 182 A+ L+ VGL HR H PS+LSGGE+QR+ IARALVN+P ++LADEPTGNLD N Sbjct: 115 QKDAIMALEKVGLSHRLTHLPSQLSGGEQQRLCIARALVNDPEILLADEPTGNLDEANEK 174 Query: 183 SIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAE 226 +I +L +L + G +++TH+ LA R + + G + +E Sbjct: 175 NILELFCKL-KQDGKTIVLITHNPDLATFADRTIILSHGVMKSE 217
>gi|34557887|ref|NP_907702.1| ABC TRANSPORT PROTEIN [Wolinella succinogenes DSM 1740] gi|34483605|emb|CAE10602.1| ABC TRANSPORT PROTEIN [Wolinella succinogenes] Length = 216 Score = 296 bits (762), Expect = 2e-79 Identities = 91/223 (40%), Positives = 135/223 (60%), Gaps = 9/223 (4%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M+ ++L+ N+ KR+ + L ++ V +GE +I+G SGSGK+TLL++L +DT Sbjct: 1 MS-VVLELKNIEKRFG----EVVALEGINLVVNKGEWTSIMGPSGSGKTTLLNILSLMDT 55 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPA 120 PT G+ G+ S L A + +R +K+G I+Q HL+P +ALENV + + Sbjct: 56 PTRGEYHLGGEDASALDEAKQLLIRREKIGLIFQQFHLIPYLSALENVMIAQYYH---SS 112 Query: 121 EINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARN 180 A E L VGL HR HRPSELSGGE+QR+ IAR+L+NNP ++LADEPTGNLD +N Sbjct: 113 VDEEDAKEALHKVGLTHRLTHRPSELSGGEQQRLCIARSLINNPDILLADEPTGNLDEQN 172 Query: 181 ADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRL 223 I L L R +G +++TH+ L + + + +R GR+ Sbjct: 173 EKVILDLFCRL-REEGKTIILITHNPDLGRYGDKVVRLRHGRM 214
>gi|32262265|gb|AAP77313.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] gi|32266215|ref|NP_860247.1| hypothetical protein HH0716 [Helicobacter hepaticus ATCC 51449] Length = 351 Score = 292 bits (750), Expect = 6e-78 Identities = 81/226 (35%), Positives = 132/226 (58%), Gaps = 5/226 (2%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ +++ K Y G L N+ V +G++M I+G SG+GKSTL+ ++ L+ PTSG Sbjct: 1 MIKLNHINKTYPNG---FVALKNIDLEVAKGDIMGIIGYSGAGKSTLIRIINRLEEPTSG 57 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124 + +G M L +++ QK+G I+Q +LL +NVA L I K I Sbjct: 58 TLFVDGVNMLGLKQKEL-QMQRQKIGMIFQHFNLLSARNVFDNVAFALEIAKWDKKAIKP 116 Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 R E+L+ VGL RA+ PS+LSGG++QRVAIARAL N+P+++L DE T LD + SI Sbjct: 117 RVDELLELVGLSERASFFPSQLSGGQKQRVAIARALANHPKVLLCDEATSALDTKTTKSI 176 Query: 185 FQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAELSL 229 LL ++ R G + +++TH +++ + ++ + DG + S+ Sbjct: 177 LALLRDIQRRLGLSVVLITHQIEVVREICNKMCVVSDGAIVERGSV 222
>gi|2314761|gb|AAD08616.1| ABC transporter, ATP-binding protein (abc) [Helicobacter pylori 26695] gi|7445779|pir||H64716 ABC transporter, ATP-binding protein - Helicobacter pylori (strain 26695) gi|15646183|ref|NP_208367.1| ABC transporter, ATP-binding protein (abc) [Helicobacter pylori 26695] Length = 327 Score = 286 bits (735), Expect = 4e-76 Identities = 78/228 (34%), Positives = 133/228 (58%), Gaps = 5/228 (2%) Query: 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTS 63 ++++ N+ K Y+ G L V+ + +G+++ ++G SG+GKSTL+ L+ L+ P+S Sbjct: 1 MVVELKNIEKIYENG---FHALKGVNLELKKGDILGVIGYSGAGKSTLIRLINCLERPSS 57 Query: 64 GDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIN 123 G+V+ NG + KL + R QK+G I+Q +LL ENVA L I + + +I Sbjct: 58 GEVLVNGVNLLKLKPKELQKAR-QKIGMIFQHFNLLSAKNVFENVAFALEIARWEKNKIK 116 Query: 124 SRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADS 183 SR E+L+ VGL+ + + P +LSGG++QRVAIAR+L N P L+L DE T LD++ S Sbjct: 117 SRVHELLELVGLEDKMHFYPKQLSGGQKQRVAIARSLANCPDLLLCDEATSALDSKTTHS 176 Query: 184 IFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAELSLM 230 I LL + + + + +TH++++ K ++ + G + S+ Sbjct: 177 ILTLLSGIQKKLDLSIVFITHEIEVVKELCNQMCVISSGEIVERGSVE 224
>gi|15612549|ref|NP_224202.1| abc transporter, ATP-binding protein [Helicobacter pylori J99] gi|4156118|gb|AAD07069.1| abc transporter, ATP-binding protein [Helicobacter pylori J99] gi|7445832|pir||F71800 ABC transporter, ATP-binding protein - Helicobacter pylori (strain J99) Length = 327 Score = 282 bits (724), Expect = 6e-75 Identities = 77/228 (33%), Positives = 131/228 (57%), Gaps = 5/228 (2%) Query: 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTS 63 ++++ N+ K Y+ G L V+ + +G+++ ++G SG+GKSTL+ L+ L+ P+S Sbjct: 1 MVVELKNIEKIYENG---FHALKGVNLELKKGDILGVIGYSGAGKSTLIRLINCLERPSS 57 Query: 64 GDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIN 123 G+V+ NG + L + R QK+G I+Q +LL ENVA L I + + +I Sbjct: 58 GEVLVNGVNLLNLKPKELQKAR-QKIGMIFQHFNLLSAKNVFENVAFALEIARWEKTKIK 116 Query: 124 SRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADS 183 SR E+L+ VGL+ + + P +LSGG++QRVAIAR+L N P L+L DE T LD++ S Sbjct: 117 SRVHELLELVGLEDKVHFYPKQLSGGQKQRVAIARSLANCPNLLLCDEATSALDSKTTHS 176 Query: 184 IFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAELSLM 230 I LL + + + + +TH +++ K ++ + G + S+ Sbjct: 177 ILTLLSGIQKKFDLSIVFITHQIEVVKELCNQMCVISSGEIVERGSVE 224
>gi|57241114|ref|ZP_00369061.1| ABC transporter, ATP-binding protein [Campylobacter lari RM2100] gi|57018035|gb|EAL54810.1| ABC transporter, ATP-binding protein [Campylobacter lari RM2100] Length = 318 Score = 279 bits (716), Expect = 5e-74 Identities = 82/225 (36%), Positives = 130/225 (57%), Gaps = 6/225 (2%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ NL K Y + V+ +VS V EGE+ A+VG SG+GKSTLL + GL+ SG Sbjct: 1 MIKIQNLKKYYGKE----LVIDDVSLEVKEGEIYALVGHSGAGKSTLLRCINGLENYQSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124 V G+ + KL E R + +G I+Q L+ ENVAMPL I + I Sbjct: 57 SVEVFGKEIQKLKEKELREFR-KNIGMIFQHFALMSRKNVFENVAMPLEIHNFDKSTIQK 115 Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 R E+L VGL ++ P+ELSGG++QRVAIARAL NP+++L+DE T LD ++I Sbjct: 116 RVDELLDLVGLLAKSKAYPNELSGGQKQRVAIARALALNPKILLSDEATSALDPNTTNNI 175 Query: 185 FQLLGELNRLQGTAFLVVTHDLQLAKR-MSRQLEMRDGRLTAELS 228 +L+ ++N+ + ++VTH+++ K+ + + + G++ + Sbjct: 176 LELIAKINQEFNISVVLVTHEMEAVKQIAQKAVLLEHGQIIGQGK 220
>gi|2440008|gb|AAC45666.1| AbcC [Helicobacter pylori] Length = 327 Score = 278 bits (714), Expect = 9e-74 Identities = 77/228 (33%), Positives = 132/228 (57%), Gaps = 5/228 (2%) Query: 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTS 63 ++++ N+ K Y+ G L V+ + +G+++ ++G SG+GKSTL+ L+ L+ P+S Sbjct: 1 MVVELKNIEKIYENG---FHALKGVNLELKKGDILGVIGYSGAGKSTLIRLINCLERPSS 57 Query: 64 GDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIN 123 G+V+ NG + KL + R QK+G I+Q +LL ENVA L I + + +I Sbjct: 58 GEVLVNGVNLLKLKPKELQKAR-QKIGMIFQHFNLLSAKDVFENVAFALEIARWEKTKIK 116 Query: 124 SRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADS 183 SR E+L+ VGL+ + + P +LSGG+++RVAIAR+L N P L+L DE T LD++ S Sbjct: 117 SRVHELLELVGLEDKVHFYPKQLSGGQKERVAIARSLANCPDLLLCDEATSALDSKTTHS 176 Query: 184 IFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAELSLM 230 I LL + + + + +TH +++ K ++ + G + S+ Sbjct: 177 ILTLLSGIQKKLDLSVVFITHQIEVVKELCNQMCVISSGEIVERGSVE 224
>gi|57242092|ref|ZP_00370032.1| probable abc transporter ATP-binding protein peb1c [Campylobacter upsaliensis RM3195] gi|57017284|gb|EAL54065.1| probable abc transporter ATP-binding protein peb1c [Campylobacter upsaliensis RM3195] Length = 242 Score = 268 bits (689), Expect = 7e-71 Identities = 72/224 (32%), Positives = 119/224 (53%), Gaps = 9/224 (4%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ N+ K Y + VL +++ ++ EGE + I+G SGSGKST + + GL+ +SG Sbjct: 1 MIELKNVNKYYG----KHHVLKDINLTIKEGEKLVIIGPSGSGKSTTIRCMNGLEEVSSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGKKKPAEIN 123 +VI N ++ + + ++Q +L P + LEN+ + P+ + KK E Sbjct: 57 EVIINNLVLTHKNKIEIC---RKYCAMVFQHFNLYPHMSVLENLTLAPMKLQKKSRKEAE 113 Query: 124 SRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADS 183 A LK VGL +A P+ LSGG++QRVAIAR+L +L DEPT LD Sbjct: 114 ETAYHYLKVVGLVDKAKVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDPETIQE 173 Query: 184 IFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAE 226 + ++ +++ T +VVTH++ A+ R + M DG + E Sbjct: 174 VLDVMKKISHQSNTTMVVVTHEMGFAREVADRIIFMEDGAIVEE 217
>gi|57237750|ref|YP_178998.1| amino acid ABC transporter, ATP-binding protein PEB1 [Campylobacter jejuni RM1221] gi|57166554|gb|AAW35333.1| amino acid ABC transporter, ATP-binding protein PEB1 [Campylobacter jejuni RM1221] gi|6968359|emb|CAB73179.1| ABC-type amino-acid transporter ATP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|11277299|pir||A81366 ABC-type amino-acid transporter ATP-binding protein Cj0922c [imported] - Campylobacter jejuni (strain NCTC 11168) gi|15792251|ref|NP_282074.1| ABC-type amino-acid transporter ATP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|9297113|sp|P45677|PEB1C_CAMJE Probable ABC transporter ATP-binding protein PEB1C Length = 242 Score = 267 bits (686), Expect = 2e-70 Identities = 77/224 (34%), Positives = 120/224 (53%), Gaps = 9/224 (4%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ N+ K Y VL N++ SV EGE + I+G SGSGKST + + GL+ +SG Sbjct: 1 MIELKNVNKYYG----THHVLKNINLSVKEGEKLVIIGPSGSGKSTTIRCMNGLEEVSSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGKKKPAEIN 123 +V+ N ++ + + ++Q +L P T L+N+ + P+ + KK E Sbjct: 57 EVVVNNLVLNHKNKIEIC---RKYCAMVFQHFNLYPHMTVLQNLTLAPMKLQKKSKKEAE 113 Query: 124 SRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADS 183 A + LK VGL +AN P+ LSGG++QRVAIAR+L +L DEPT LD Sbjct: 114 ETAFKYLKVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDPETIQE 173 Query: 184 IFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAE 226 + ++ E++ T +VVTH++ AK R + M DG + E Sbjct: 174 VLDVMKEISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEE 217
>gi|57168777|ref|ZP_00367908.1| ABC transporter, ATP-binding protein [Campylobacter coli RM2228] gi|57019824|gb|EAL56507.1| ABC transporter, ATP-binding protein [Campylobacter coli RM2228] Length = 180 Score = 265 bits (680), Expect = 7e-70 Identities = 80/183 (43%), Positives = 118/183 (64%), Gaps = 4/183 (2%) Query: 41 VGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLP 100 +G SGSGKSTLL++L +D P+SG I + + + +++ K LR +K+G I+Q HL+P Sbjct: 1 MGPSGSGKSTLLNILSLMDDPSSGKYILDNEDLEQINEEQKITLRREKIGLIFQQFHLIP 60 Query: 101 DFTALENVAMPLLIGKKKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARAL 160 +ALENV + + A +L+ VGL HR +H PS+LSGGE+QRV IARAL Sbjct: 61 YLSALENVMLSQYYH---SSVDEEDAKAVLEKVGLSHRLSHLPSQLSGGEQQRVCIARAL 117 Query: 161 VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRD 220 +NNP ++LADEPTGNLD N + + L +L + +G +++TH+ +LAK R L ++ Sbjct: 118 INNPEILLADEPTGNLDEANEKIVLETLQKL-KNEGKTIVLITHNPELAKFADRTLILQH 176 Query: 221 GRL 223 G L Sbjct: 177 GIL 179
>gi|34556714|ref|NP_906529.1| AMINO ACID PERMEASE ATP-BINDING PROTEIN [Wolinella succinogenes DSM 1740] gi|34482428|emb|CAE09429.1| AMINO ACID PERMEASE ATP-BINDING PROTEIN [Wolinella succinogenes] Length = 246 Score = 263 bits (674), Expect = 4e-69 Identities = 77/230 (33%), Positives = 133/230 (57%), Gaps = 9/230 (3%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M++ ++Q N+ K + + L+NV+FSV +GE++ + G SGSGKSTL+ + L+ Sbjct: 1 MSQKIVQMTNVHKYFGD----FHALNNVNFSVRKGEIVVVCGPSGSGKSTLIRCINALEE 56 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLL-IGKKKP 119 GD+I +GQ + S ++R++ +G ++Q +L P T LEN+++ + + Sbjct: 57 IDEGDIIIDGQNLYDRS-TDINKIRSE-VGMVFQHFNLFPHLTILENISIAQIKVKGLSK 114 Query: 120 AEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDAR 179 E ++ ++E+LK V L+H+A P+ELSGG++QRVAIAR + P++VL DEPT LD Sbjct: 115 KEADANSMEILKKVQLEHKAQGYPNELSGGQKQRVAIARTVAMKPKVVLFDEPTSALDPE 174 Query: 180 NADSIFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAELS 228 + ++ +L R + VTH++ AK R + M G + + + Sbjct: 175 MIGEVLDVMRQLAREH-YTLVCVTHEMGFAKEVSDRIIFMDHGVIMEDTT 223
>gi|1072932|pir||C48518 ABC-type transport protein (PEB1 5' region) - Campylobacter jejuni gi|388564|gb|AAA02918.1| major cell-binding factor receptor Length = 242 Score = 261 bits (671), Expect = 9e-69 Identities = 76/224 (33%), Positives = 118/224 (52%), Gaps = 9/224 (4%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ N+ K Y VL + SV EGE + I+G SGSGKST + + GL+ +SG Sbjct: 1 MIELKNVNKYYG----THHVLKIFNLSVKEGEKLVIIGPSGSGKSTTIRCMNGLEEVSSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGKKKPAEIN 123 +V+ N ++ + + ++Q +L P T L+N+ + P+ + KK E Sbjct: 57 EVVVNNLVLNHKNKIEIC---RKYCAMVFQHFNLYPHMTVLQNLTLAPMKLQKKSKKEAE 113 Query: 124 SRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADS 183 A + LK VGL +AN P+ LSGG++QRVAIAR+L +L DEPT LD Sbjct: 114 ETAFKYLKVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDPETIQE 173 Query: 184 IFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAE 226 + ++ E++ T +VVTH++ AK R + M DG + E Sbjct: 174 VLDVMKEISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEE 217
>gi|57237619|ref|YP_178867.1| ABC transporter, ATP-binding protein [Campylobacter jejuni RM1221] gi|57166423|gb|AAW35202.1| ABC transporter, ATP-binding protein [Campylobacter jejuni RM1221] gi|6968220|emb|CAB73039.1| ABC transport system ATP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|11278930|pir||F81348 ABC transport system ATP-binding protein Cj0774c [imported] - Campylobacter jejuni (strain NCTC 11168) gi|15792112|ref|NP_281935.1| ABC transport system ATP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 336 Score = 259 bits (665), Expect = 5e-68 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 21/237 (8%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ NL K Y + V+++VS + +GE+ AIVG SG+GKSTLL + GL+ G Sbjct: 1 MIKIKNLKKYYGKE----LVINDVSLEIKKGEIYAIVGHSGAGKSTLLRCINGLENYQEG 56 Query: 65 DVIFNGQPMSKLSSAAKAELR--NQKLGFIYQFHHLLPDFTALENVAMPL---------- 112 + Q + LS ELR + +G I+Q L+ ENVAMPL Sbjct: 57 SLKVFDQEIKDLSQKKSKELRMLRKDIGMIFQNFALMERKNVFENVAMPLRTHYTQCKFH 116 Query: 113 --LIGK--KKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVL 168 L K EI + +L+ VGLDH+ P ELSGG++QRVAIARAL NP+++L Sbjct: 117 AKLFNKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQRVAIARALALNPKILL 176 Query: 169 ADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLT 224 +DE T LD +I +L+ ++N G ++VTH++ + K + L + G++ Sbjct: 177 SDEATSALDPNTTKNILELISKINAEFGITVVLVTHEMDVVKDIAQKALLLEHGQII 233
>gi|57167770|ref|ZP_00366910.1| ABC transporter, ATP-binding protein [Campylobacter coli RM2228] gi|57020892|gb|EAL57556.1| ABC transporter, ATP-binding protein [Campylobacter coli RM2228] Length = 336 Score = 250 bits (642), Expect = 2e-65 Identities = 80/237 (33%), Positives = 127/237 (53%), Gaps = 21/237 (8%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ NL K Y + V+++VS + +GE+ AIVG SG+GKSTLL + GL++ G Sbjct: 1 MIKIQNLKKYYGKE----LVINDVSLEIKKGEIYAIVGHSGAGKSTLLRCINGLESYQEG 56 Query: 65 DVIFNGQPMSKLSSAAKAELR--NQKLGFIYQFHHLLPDFTALENVAMPL--------LI 114 + + LS +LR + +G I+Q L+ ENVAMPL + Sbjct: 57 SLKVLDAEIKDLSQNNPKKLRMLRKDIGMIFQNFALMERKNVFENVAMPLRMHYSQCKIY 116 Query: 115 GK------KKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVL 168 K ++N + +L VGLDH+ P ELSGG++QRVAIARAL NP+++L Sbjct: 117 SKLFGKEYMSEKDLNQKVNSLLDVVGLDHKNKAYPRELSGGQKQRVAIARALTLNPKILL 176 Query: 169 ADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLT 224 +DE T LD +I +L+ ++N G ++VTH++ + K + L + G++ Sbjct: 177 SDEATSALDPNTTKNILELIAKINAEFGITVVLVTHEMDVVKDVAQKALLLEHGQII 233
>gi|34558234|ref|NP_908049.1| ABC TRANSPORT ATP-BINDING PROTEIN [Wolinella succinogenes DSM 1740] gi|34483953|emb|CAE10949.1| ABC TRANSPORT ATP-BINDING PROTEIN [Wolinella succinogenes] Length = 303 Score = 249 bits (640), Expect = 3e-65 Identities = 73/202 (36%), Positives = 112/202 (55%), Gaps = 2/202 (0%) Query: 25 LHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 L +S + +G + +VG SG+GKSTLL + GL+ G++ +G + L A Sbjct: 2 LDQISLEIPKGTIYGLVGHSGAGKSTLLRTINGLEGFDEGELWVDGVDLQSLQGDALRVF 61 Query: 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLKAVGLDHRANHRPS 144 R + +G I+Q L+ ENVA+PL K AEI R +L VGL+ +++ PS Sbjct: 62 R-KNIGMIFQHFSLMARQNVFENVALPLRCWKYPEAEIQKRVFNLLSLVGLESKSDSYPS 120 Query: 145 ELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTH 204 LSGG++QRVAIARAL P+++L+DE T LD SI LL +N+ G ++VTH Sbjct: 121 ALSGGQKQRVAIARALTLEPQILLSDEATSALDPSMTQSILDLLQTINQELGVTVVLVTH 180 Query: 205 DLQLAKR-MSRQLEMRDGRLTA 225 ++++ K+ + G+L Sbjct: 181 EMEVVKKLCHHAAFLEGGKLLR 202
>gi|57505383|ref|ZP_00371311.1| ABC transporter, ATP-binding protein [Campylobacter upsaliensis RM3195] gi|57016208|gb|EAL52994.1| ABC transporter, ATP-binding protein [Campylobacter upsaliensis RM3195] Length = 335 Score = 249 bits (638), Expect = 6e-65 Identities = 75/237 (31%), Positives = 129/237 (54%), Gaps = 21/237 (8%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ NL K Y + V+++VS + +GE+ AIVG SG+GKSTLL + GL++ G Sbjct: 1 MIKIQNLQKYYGKE----LVINDVSLEIKKGEIYAIVGHSGAGKSTLLRCINGLESYQKG 56 Query: 65 DVIFNGQPMSKLSSAAKAELR--NQKLGFIYQFHHLLPDFTALENVAMPL--------LI 114 + + L +L+ + +G I+Q L+ EN+AMPL ++ Sbjct: 57 SLKVFDLEIKDLLENEPEKLKGLRKDVGMIFQNFALMNRKNVFENIAMPLRTHYTQCKIM 116 Query: 115 GK------KKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVL 168 ++ R E+L VGL H+ N P ELSGG++QR+AIARAL NP+++L Sbjct: 117 ASLFKKDYMSEDDVKKRIDELLDIVGLSHKKNSYPKELSGGQKQRIAIARALALNPKILL 176 Query: 169 ADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLT 224 +DE T LD +I +L+ ++N+ G + ++VTH++++ K + + + G++ Sbjct: 177 SDEATSALDPNTTKNILELILKINKEFGISVVLVTHEMEVVKDIAQKAVLLEQGQII 233
>gi|57241071|ref|ZP_00369018.1| amino acid ABC transporter, ATP-binding protein [Campylobacter lari RM2100] gi|57017992|gb|EAL54767.1| amino acid ABC transporter, ATP-binding protein [Campylobacter lari RM2100] Length = 242 Score = 249 bits (638), Expect = 6e-65 Identities = 75/225 (33%), Positives = 127/225 (56%), Gaps = 9/225 (4%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ +NL K+Y + +VL ++S V +G+++AI+G SG GKST L L L+TP SG Sbjct: 1 MIKIENLVKKYGD----LEVLKDISVEVHKGDIIAIIGPSGGGKSTFLRCLNKLETPDSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGKKKPAEIN 123 ++ N + L + A QK+ ++Q +L + LEN+ + P+ E Sbjct: 57 NIYINDVNV--LDNKADINQIRQKVSMVFQHFNLFNNKNVLENLCLAPVQTKIMSKDEAI 114 Query: 124 SRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADS 183 +A ++L+ VGL + N+ P +LSGG++QR+AIAR+L+ NP ++L DEPT LD Sbjct: 115 KKARKLLEKVGLSDKENYFPHKLSGGQKQRIAIARSLMMNPDVILFDEPTSALDPEMIGE 174 Query: 184 IFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAEL 227 + ++ E+ + G LVVTH++ A+ +R M G + + Sbjct: 175 VLNIMKEVAKE-GLTMLVVTHEMGFARNVANRIFFMDKGIIAVDE 218
>gi|6967940|emb|CAB75107.1| amino-acid ABC transporter ATP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|11277300|pir||H81391 amino-acid ABC transporter ATP-binding protein Cj0469 [imported] - Campylobacter jejuni (strain NCTC 11168) gi|15791833|ref|NP_281656.1| amino-acid ABC transporter ATP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 253 Score = 246 bits (631), Expect = 4e-64 Identities = 73/228 (32%), Positives = 123/228 (53%), Gaps = 11/228 (4%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M+ +L+ +NL K Y L +++ V E++ I+G SG GKSTLL + GL+ Sbjct: 1 MS--ILKIENLQKYYGS----HHALKDINLEVKAKEVVVILGPSGCGKSTLLRCINGLEE 54 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGKKKP 119 SG++ + + + K +R QK+G ++Q + L + EN+ + P+ + K+K Sbjct: 55 IASGNIYIDNEKIDK-DFKEWPRMR-QKVGMVFQSYELFEHLSVEENILLGPMKVQKRKK 112 Query: 120 AEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDAR 179 E+ A L+ VGL H+ + P ELSGG++QR+AI R+L NP L+L DE T LD Sbjct: 113 DEVLKEAKIWLEKVGLLHKIHAYPRELSGGQKQRIAIVRSLCMNPELMLFDEVTAALDPE 172 Query: 180 NADSIFQLLGELNRLQGTAFLVVTHDLQLA-KRMSRQLEMRDGRLTAE 226 + +++ L + G L+VTH++ A + + M +G++ E Sbjct: 173 IVREVLEVMLNLAKE-GMTMLIVTHEMGFAKAVADKIIFMDEGKIIEE 219
>gi|57237523|ref|YP_178537.1| amino acid ABC transporter, ATP-binding protein [Campylobacter jejuni RM1221] gi|57166327|gb|AAW35106.1| amino acid ABC transporter, ATP-binding protein [Campylobacter jejuni RM1221] Length = 245 Score = 246 bits (630), Expect = 6e-64 Identities = 73/228 (32%), Positives = 124/228 (54%), Gaps = 11/228 (4%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M+ +L+ +NL K Y L +++ V + E++ I+G SG GKSTLL + GL+ Sbjct: 1 MS--ILKIENLQKYYGS----HHALKDINLEVKDKEVVVILGPSGCGKSTLLRCINGLEE 54 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGKKKP 119 SG++ + + + K +R QK+G ++Q + L + EN+ + P+ + K+K Sbjct: 55 IASGNIYIDNEKIDK-DFKEWPRMR-QKVGMVFQSYELFEHLSVEENILLGPMKVQKRKK 112 Query: 120 AEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDAR 179 E+ A L+ VGL H+ + P ELSGG++QR+AI R+L NP L+L DE T LD Sbjct: 113 DEVLQEAKIWLEKVGLLHKIHAYPRELSGGQKQRIAIVRSLCMNPELMLFDEVTAALDPE 172 Query: 180 NADSIFQLLGELNRLQGTAFLVVTHDLQLA-KRMSRQLEMRDGRLTAE 226 + +++ L + G L+VTH++ A + + M +G++ E Sbjct: 173 IVREVLEVMLNLAKE-GMTMLIVTHEMGFAKAVADKIIFMDEGKIIEE 219
>gi|57241162|ref|ZP_00369109.1| glutamine ABC transporter, ATP-binding protein (glnQ) [Campylobacter lari RM2100] gi|57018083|gb|EAL54858.1| glutamine ABC transporter, ATP-binding protein (glnQ) [Campylobacter lari RM2100] Length = 245 Score = 242 bits (621), Expect = 5e-63 Identities = 73/227 (32%), Positives = 119/227 (52%), Gaps = 11/227 (4%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M+ +L+ NL K Y VL +++ V + E++ I+G SG GKSTLL + GL+ Sbjct: 1 MS--ILKIQNLQKYYDN----HHVLKDINLEVSQKEVVVILGPSGCGKSTLLRCINGLEE 54 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGKKKP 119 G + + + + K + ++R QK+G ++Q + L +N+ + PL + K+K Sbjct: 55 MADGAIFVDDEKIDK-NYKNWTQIR-QKIGMVFQSYELFDHLNVEQNILLGPLKVQKRKK 112 Query: 120 AEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDAR 179 E+ A L VGL H+ P ELSGG++QR+AI R+L NP ++L DE T LD Sbjct: 113 EEVLEEAKYWLDRVGLLHKLKAYPKELSGGQKQRIAIVRSLCMNPEIMLFDEVTAALDPE 172 Query: 180 NADSIFQLLGELNRLQGTAFLVVTHDLQLA-KRMSRQLEMRDGRLTA 225 + ++ L + G L+VTH++ A R + M DG++ Sbjct: 173 IVREVLDVILNLAKD-GMTMLIVTHEMGFAKAVADRIVFMDDGKIVE 218
>gi|57505195|ref|ZP_00371127.1| glutamine/glutamate ABC transporter, ATP-binding protein [Campylobacter coli RM2228] gi|57019027|gb|EAL55757.1| glutamine/glutamate ABC transporter, ATP-binding protein [Campylobacter coli RM2228] Length = 245 Score = 239 bits (613), Expect = 4e-62 Identities = 75/233 (32%), Positives = 121/233 (51%), Gaps = 11/233 (4%) Query: 1 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT 60 M+ +L+ NL K Y L N++ V + E++ I+G SG GKSTLL + GL+ Sbjct: 1 MS--ILKIKNLQKYYGF----HHALKNINLEVKQKEVVVILGPSGCGKSTLLRCINGLEE 54 Query: 61 PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAM-PLLIGKKKP 119 G + GQ + +R QK+G ++Q + L + +N+ + PL + K+ Sbjct: 55 IADGVIEI-GQDKIDKNFKDWTRVR-QKVGMVFQSYELFEHLSVKDNILLGPLKVQKRAK 112 Query: 120 AEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDAR 179 E+ A L+ VGL H+ + P ELSGG++QR+AI R+L NP L+L DE T LD Sbjct: 113 EEVLQEAKIWLEKVGLAHKIDAYPKELSGGQKQRIAIVRSLCMNPELMLFDEVTAALDPE 172 Query: 180 NADSIFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAELSLMG 231 + +++ L + G L+VTH++ A+ R + M +G + E + G Sbjct: 173 IVREVLEVILNLAKD-GMTMLIVTHEMGFARAVADRIIFMDNGEIIEENTPDG 224
>gi|34556821|ref|NP_906636.1| ABC-TYPE TRANSPORTER, ATPASE COMPONENT [Wolinella succinogenes DSM 1740] gi|34482536|emb|CAE09536.1| ABC-TYPE TRANSPORTER, ATPASE COMPONENT [Wolinella succinogenes] Length = 225 Score = 238 bits (611), Expect = 8e-62 Identities = 87/221 (39%), Positives = 127/221 (57%), Gaps = 4/221 (1%) Query: 6 LQCDNLCKRYQEGS-VQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 + + + K Y G L V V +GE++ + G SGSGKSTLL L+GGL PT G Sbjct: 4 IVVNGVSKVYHAGKANAFFALKKVHLEVEKGEVVILKGVSGSGKSTLLSLIGGLSKPTEG 63 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124 +++ G ++KL + R++ +GFI+Q +LL T +NV PL + + + AEI Sbjct: 64 EILVEGHNIAKLPDVMSSSYRHKSVGFIFQSFNLLAGLTVYQNVMAPLGLTQLRGAEIEE 123 Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184 R L +DH+ + + ELSGGERQR AIARA+V NP ++LADEPT NLDA+N+ + Sbjct: 124 RIHWALGVACIDHKKHQKVGELSGGERQRCAIARAIVMNPAMILADEPTANLDAQNSLAF 183 Query: 185 FQLLGELNRLQGTAFLVVTHDL--QLAKRMSRQLEMRDGRL 223 ++L + G + L+ THD + R L MRDG + Sbjct: 184 VEILKSF-KQMGKSVLIATHDPLFDEVGEVDRSLMMRDGEI 223
>gi|57237731|ref|YP_178979.1| amino acid ABC transporter, ATP-binding protein [Campylobacter jejuni RM1221] gi|57166535|gb|AAW35314.1| amino acid ABC transporter, ATP-binding protein [Campylobacter jejuni RM1221] Length = 242 Score = 234 bits (600), Expect = 2e-60 Identities = 69/226 (30%), Positives = 125/226 (55%), Gaps = 9/226 (3%) Query: 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64 +++ NL K+Y + +VL N++ ++ +G+++AI+G SG GKST L + L+ SG Sbjct: 1 MIEVKNLQKKYG----ELEVLKNINTTISKGDVIAIIGPSGGGKSTFLRCINRLELADSG 56 Query: 65 DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKK-KPAEIN 123 +++ N Q + ++R QK+ ++Q +L + +EN+ + + E Sbjct: 57 EILINKQNILD-KEIDINKIR-QKISMVFQHFNLFANKNVMENLCLTPIKTGILSQEEAI 114 Query: 124 SRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADS 183 +A +L VGL + N P +LSGG++QR+AIAR+L+ NP ++L DEPT LD Sbjct: 115 KKAKLLLAKVGLADKENIMPHKLSGGQKQRIAIARSLMMNPDVILFDEPTSALDPEMIGE 174 Query: 184 IFQLLGELNRLQGTAFLVVTHDLQLAK-RMSRQLEMRDGRLTAELS 228 + ++ ++ + G LVVTH++ A+ +R M G++ + S Sbjct: 175 VLSIMKDVAKE-GLTMLVVTHEMGFARNVANRIFFMDKGKIAVDAS 219
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Apr 3, 2005 3:19 AM Number of letters in database: 819,463,594 Number of sequences in database: 2,419,489 Lambda K H 0.318 0.134 0.373 Gapped Lambda K H 0.267 0.0625 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 144,037,445 Number of Sequences: 2419489 Number of extensions: 11181748 Number of successful extensions: 31964 Number of sequences better than 10.0: 2549 Number of HSP's better than 10.0 without gapping: 2378 Number of HSP's successfully gapped in prelim test: 193 Number of HSP's that attempted gapping in prelim test: 22963 Number of HSP's gapped (non-prelim): 3739 length of query: 233 length of database: 819,463,594 effective HSP length: 123 effective length of query: 110 effective length of database: 521,866,447 effective search space: 57405309170 effective search space used: 57405309170 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 74 (32.5 bits)
